RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 ARSIQ5FYB1 569 aa18.68■□□□□ 0.58
PRKCSH-209ENST00000589838 LDLRAP1Q5SW96 308 aa18.68■□□□□ 0.58
PRKCSH-209ENST00000589838 TTC33Q6PID6 262 aaPredicted RBP18.68■□□□□ 0.58
PRKCSH-209ENST00000589838 ALDH16A1Q8IZ83 802 aa18.68■□□□□ 0.58
PRKCSH-209ENST00000589838 FRS2Q8WU20 508 aa18.68■□□□□ 0.58
PRKCSH-209ENST00000589838 FBXL8Q96CD0 374 aa18.68■□□□□ 0.58
PRKCSH-209ENST00000589838 ITCHQ96J02 903 aa18.68■□□□□ 0.58
PRKCSH-209ENST00000589838 VPS50Q96JG6 964 aa18.68■□□□□ 0.58
PRKCSH-209ENST00000589838 KCNH6Q9H252 994 aa18.68■□□□□ 0.58
PRKCSH-209ENST00000589838 PCDH12Q9NPG4 1184 aa18.68■□□□□ 0.58
PRKCSH-209ENST00000589838 PTTG2Q9NZH5 202 aa18.68■□□□□ 0.58
PRKCSH-209ENST00000589838 IL36AQ9UHA7 158 aa18.68■□□□□ 0.58
PRKCSH-209ENST00000589838 ELOVL7A1L3X0 281 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 CCDC160A6NGH7 325 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 EI24O14681 340 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 UGDHO60701 494 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 RFPL2O75678 378 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 SLCO2B1O94956 709 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 SRPRAP08240 638 aaKnown RBP18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 HNRNPA1P09651 372 aaKnown RBP eCLIP18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 MAP4P27816 1152 aaKnown RBP18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 CAPGP40121 348 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 LIPJQ5W064 366 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 MSANTD1Q6ZTZ1 278 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 VRK3Q8IV63 474 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 KRTCAP2Q8N6L1 136 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 ATL1Q8WXF7 558 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 MAN2B2Q9Y2E5 1009 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 A0A087WXM4 84 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 A0A096LPI6 279 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 MYOCOSA0A1B0GUC4 107 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 PLOD2O00469 737 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 VILLO15195 856 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 ASLP04424 464 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 BMPR1AP36894 532 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 HNRNPFP52597 415 aaKnown RBP18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 LSAMPQ13449 338 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 ZNF805Q5CZA5 627 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 NAIF1Q69YI7 327 aaPredicted RBP18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 B3GNT6Q6ZMB0 384 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 Q6ZVL8 140 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 DPPA4Q7L190 304 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 TMEM132CQ8N3T6 1108 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 BEND7Q8N7W2 519 aaPredicted RBP18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 ZNF548Q8NEK5 533 aaPredicted RBP18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 OR10A6Q8NH74 314 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 NUDT8Q8WV74 236 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 CYGBQ8WWM9 190 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 FIG4Q92562 907 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 SCAMP4Q969E2 229 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 TESCQ96BS2 214 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 MRGPRX3Q96LB0 322 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 P2RY13Q9BPV8 354 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 ADGRE2Q9UHX3 823 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 INVSQ9Y283 1065 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 NEUROG3Q9Y4Z2 214 aa18.67■□□□□ 0.58
PRKCSH-209ENST00000589838 C16orf96A6NNT2 1141 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 TTC34A8MYJ7 566 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 BMP10O95393 424 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 GSTM1P09488 218 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 JUPP14923 745 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 CTNNB1P35222 781 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 HALP42357 657 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 GSTM4Q03013 218 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 LRIF1Q5T3J3 769 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 HENMT1Q5T8I9 393 aaKnown RBP18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 FRG2Q64ET8 278 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 TMEM215Q68D42 235 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 RASGRP3Q8IV61 690 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 MICU2Q8IYU8 434 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 ZFP28Q8NHY6 868 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 CSGALNACT1Q8TDX6 532 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 VPS35Q96QK1 796 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 FRG2BQ96QU4 278 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 FAM83CQ9BQN1 747 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 RIOK2Q9BVS4 552 aaKnown RBP18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 YTHDF1Q9BYJ9 559 aaKnown RBP18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 RBM38Q9H0Z9 239 aaKnown RBP18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 SLC22A14Q9Y267 594 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 FADS3Q9Y5Q0 445 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 V9GYQ6 96 aa18.66■□□□□ 0.58
PRKCSH-209ENST00000589838 FAM220BPB1ANY3 271 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 H0YAE9 185 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 ZNF197O14709 1029 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 PRSS23O95084 383 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 ALDH3B2P48448 385 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 CSTF3Q12996 717 aaKnown RBP18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 SYTL3Q4VX76 610 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 ERAP2Q6P179 960 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 NEK5Q6P3R8 708 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 SERPINA13PQ6UXR4 307 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 NECAB2Q7Z6G3 386 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 RAVER1Q8IY67 606 aaKnown RBP18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 NRSN1Q8IZ57 195 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 NAT16Q8N8M0 369 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 MAGEE2Q8TD90 523 aaPredicted RBP18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 WFIKKN2Q8TEU8 576 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 CYB5D2Q8WUJ1 264 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 BTN2A2Q8WVV5 523 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms