RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 MPP5Q8N3R9 675 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 DNAJC22Q8N4W6 341 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 ZBTB2Q8N680 514 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 GSDMBQ8TAX9 411 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 DENND1AQ8TEH3 1009 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 NDC1Q9BTX1 674 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 SPRTNQ9H040 489 aaPredicted RBP13.84□□□□□ -0.19
MBD1-220ENST00000589758 TXLNGQ9NUQ3 528 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 IRAK4Q9NWZ3 460 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 BFARQ9NZS9 450 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 PLAGL1Q9UM63 463 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 PLCL2Q9UPR0 1127 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 PLAAQ9Y263 795 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 SAR1BQ9Y6B6 198 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 GOLGA6L10A0A0M3HER8 536 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 TTLL8A6PVC2 850 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 IQCF5A8MTL0 148 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 FANCGO15287 622 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 PHF2O75151 1096 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 NDUFS3O75489 264 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 IGHEP01854 428 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 KRT14P02533 472 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 CBSLP0DN79 551 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 CBSP35520 551 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 COILP38432 576 aaPredicted RBP13.83□□□□□ -0.2
MBD1-220ENST00000589758 SESN2P58004 480 aaPredicted RBP13.83□□□□□ -0.2
MBD1-220ENST00000589758 CDK16Q00536 496 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 DEFB110Q30KQ9 67 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 CCDC137Q6PK04 289 aaKnown RBP13.83□□□□□ -0.2
MBD1-220ENST00000589758 VRK3Q8IV63 474 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 EFCAB3Q8N7B9 438 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 CFAP61Q8NHU2 1237 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 RAB11FIP5Q9BXF6 653 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 TREX1Q9NSU2 369 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 INTS7Q9NVH2 962 aaKnown RBP13.83□□□□□ -0.2
MBD1-220ENST00000589758 IFT80Q9P2H3 777 aaPredicted RBP13.83□□□□□ -0.2
MBD1-220ENST00000589758 NDOR1Q9UHB4 597 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 GNPTGQ9UJJ9 305 aa13.83□□□□□ -0.2
MBD1-220ENST00000589758 CLEC18AA5D8T8 446 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 PFDN6O15212 129 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 HCRTR1O43613 425 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 KLHL41O60662 606 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 DPM1O60762 260 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 VPS4BO75351 444 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 KLF7O75840 302 aaPredicted RBP13.82□□□□□ -0.2
MBD1-220ENST00000589758 FKBP9O95302 570 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 RPS3P23396 243 aaKnown RBP eCLIP13.82□□□□□ -0.2
MBD1-220ENST00000589758 PEBP1P30086 187 aaKnown RBP13.82□□□□□ -0.2
MBD1-220ENST00000589758 CASQ1P31415 396 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 FOLR3P41439 243 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 ARSFP54793 590 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 GPS1Q13098 491 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 CYP1B1Q16678 543 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 ZC3H12BQ5HYM0 836 aaKnown RBP13.82□□□□□ -0.2
MBD1-220ENST00000589758 CLEC18BQ6UXF7 455 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 SYT10Q6XYQ8 523 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 SDCCAG8Q86SQ7 713 aaPredicted RBP13.82□□□□□ -0.2
MBD1-220ENST00000589758 LDB1Q86U70 411 aaPredicted RBP13.82□□□□□ -0.2
MBD1-220ENST00000589758 KRT222Q8N1A0 295 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 RAB42Q8N4Z0 105 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 LINC01555Q8NAE3 123 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 CLEC18CQ8NCF0 446 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 FDCSPQ8NFU4 85 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 OR2L8Q8NGY9 312 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 LKAAEAR1Q8TD35 194 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 DLG3Q92796 817 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 RAD51AP1Q96B01 352 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 FER1L6-AS2Q96M78 137 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 GBP5Q96PP8 586 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 MENTQ9BUN1 341 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 DDX47Q9H0S4 455 aaKnown RBP13.82□□□□□ -0.2
MBD1-220ENST00000589758 P2RY12Q9H244 342 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 MRM3Q9HC36 420 aaKnown RBP13.82□□□□□ -0.2
MBD1-220ENST00000589758 EURLQ9NYK6 297 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 GPR83Q9NYM4 423 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.82□□□□□ -0.2
MBD1-220ENST00000589758 MARCH4Q9P2E8 410 aaPredicted RBP13.82□□□□□ -0.2
MBD1-220ENST00000589758 ANKMY1Q9P2S6 941 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 SLC39A10Q9ULF5 831 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 VPS4AQ9UN37 437 aa13.82□□□□□ -0.2
MBD1-220ENST00000589758 TNRC6AQ8NDV7 1962 aaKnown RBP13.82□□□□□ -0.2
MBD1-220ENST00000589758 PEX12O00623 359 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 RASGRF2O14827 1237 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 TPSB2P20231 275 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 MAGP20916 626 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 OTX2P32243 289 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 CRADDP78560 199 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 SARNPP82979 210 aaKnown RBP13.81□□□□□ -0.2
MBD1-220ENST00000589758 ATP1A4Q13733 1029 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 GRB7Q14451 532 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 SF1Q15637 639 aaKnown RBP13.81□□□□□ -0.2
MBD1-220ENST00000589758 TPSAB1Q15661 275 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 C1orf189Q5VU69 101 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 FAM69BQ5VUD6 431 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 ARMC3Q5W041 872 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 MRNIPQ6NTE8 343 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 MRPL14Q6P1L8 145 aaKnown RBP13.81□□□□□ -0.2
MBD1-220ENST00000589758 LRRC8BQ6P9F7 803 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 OTOAQ7RTW8 1153 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 CREG2Q8IUH2 290 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms