RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	DRD1	P21728	446 aa		15.02	■□□□□ -0
DDX39A-209	ENST00000589318	TMEM198	Q66K66	360 aa		15.02	■□□□□ -0
DDX39A-209	ENST00000589318	IYD	Q6PHW0	289 aa		15.02	■□□□□ -0
DDX39A-209	ENST00000589318	MBOAT1	Q6ZNC8	495 aa		15.02	■□□□□ -0
DDX39A-209	ENST00000589318	SYVN1	Q86TM6	617 aa		15.02	■□□□□ -0
DDX39A-209	ENST00000589318	CLYBL	Q8N0X4	340 aa		15.02	■□□□□ -0
DDX39A-209	ENST00000589318	LILRA3	Q8N6C8	439 aa	Predicted RBP	15.02	■□□□□ -0
DDX39A-209	ENST00000589318	ZNF420	Q8TAQ5	688 aa	Predicted RBP	15.02	■□□□□ -0
DDX39A-209	ENST00000589318	EFHD2	Q96C19	240 aa	Predicted RBP	15.02	■□□□□ -0
DDX39A-209	ENST00000589318	LRCH3	Q96II8	777 aa		15.02	■□□□□ -0
DDX39A-209	ENST00000589318	KCNA7	Q96RP8	456 aa		15.02	■□□□□ -0
DDX39A-209	ENST00000589318	OSBPL11	Q9BXB4	747 aa		15.02	■□□□□ -0
DDX39A-209	ENST00000589318	PNPLA3	Q9NST1	481 aa		15.02	■□□□□ -0
DDX39A-209	ENST00000589318	RIMS3	Q9UJD0	308 aa		15.02	■□□□□ -0
DDX39A-209	ENST00000589318	PDE10A	Q9Y233	779 aa		15.02	■□□□□ -0
DDX39A-209	ENST00000589318	MYRF	Q9Y2G1	1151 aa		15.02	■□□□□ -0
DDX39A-209	ENST00000589318	GPC6	Q9Y625	555 aa	Predicted RBP	15.02	■□□□□ -0
DDX39A-209	ENST00000589318	GFY	I3L273	518 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	AZIN1	O14977	448 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	DCX	O43602	365 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	NARS	O43776	548 aa	Known RBP	15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	C7	P10643	843 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	HOXB2	P14652	356 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	ERF	P50548	548 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	KCNC4	Q03721	635 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	AGER	Q15109	404 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	CCDC85B	Q15834	202 aa	Predicted RBP	15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	WSCD2	Q2TBF2	565 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	BCL7A	Q4VC05	210 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	THOC7	Q6I9Y2	204 aa	Known RBP	15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	TMEM220	Q6QAJ8	160 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	XKR5	Q6UX68	686 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	DCDC5	Q6ZRR9	648 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	NEK10	Q6ZWH5	1172 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	AFAP1L2	Q8N4X5	818 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	CHPT1	Q8WUD6	406 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	UBTD2	Q8WUN7	234 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	ASZ1	Q8WWH4	475 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	COX14	Q96I36	57 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	C3orf30	Q96M34	536 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	PHF7	Q9BWX1	381 aa	Predicted RBP	15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	SLC12A9	Q9BXP2	914 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	ZFR2	Q9UPR6	939 aa	Known RBP	15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	B3GNT3	Q9Y2A9	372 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	TNPO3	Q9Y5L0	923 aa	Known RBP	15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	ST14	Q9Y5Y6	855 aa		15.02	□□□□□ -0.01
DDX39A-209	ENST00000589318	SLC5A10	A0PJK1	596 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	ATG13	O75143	517 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	RNASEH2A	O75792	299 aa	Known RBP	15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	MLYCD	O95822	493 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	HSPA7	P48741	367 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	ENTPD1	P49961	510 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	FGL2	Q14314	439 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	STARD3	Q14849	445 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	ZXDC	Q2QGD7	858 aa	Predicted RBP	15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	SULT1C3	Q6IMI6	304 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	GOLGA7	Q7Z5G4	137 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	HPS6	Q86YV9	775 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	CHERP	Q8IWX8	916 aa	Known RBP	15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	OR52B6	Q8NGF0	335 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	CCDC124	Q96CT7	223 aa	Known RBP	15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	LENG8	Q96PV6	779 aa	Predicted RBP	15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	CCM2	Q9BSQ5	444 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	HGH1	Q9BTY7	390 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	OR2AG1	Q9H205	316 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	TUBB1	Q9H4B7	451 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	FBRS	Q9HAH7	460 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	TRIM39	Q9HCM9	518 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	SELENON	Q9NZV5	590 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	TRIO	O75962	3097 aa		15.01	□□□□□ -0.01
DDX39A-209	ENST00000589318	OR7A17	O14581	309 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	SLC22A2	O15244	555 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	PCDH8	O95206	1070 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	MATN4	O95460	622 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	S100B	P04271	92 aa	Predicted RBP	15	□□□□□ -0.01
DDX39A-209	ENST00000589318	C8G	P07360	202 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	CD1E	P15812	388 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	CDKL1	Q00532	357 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	GRSF1	Q12849	480 aa	Known RBP eCLIP	15	□□□□□ -0.01
DDX39A-209	ENST00000589318	NDUFA5	Q16718	116 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	ZBED5	Q49AG3	693 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	CDKL4	Q5MAI5	379 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	SDE2	Q6IQ49	451 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	PNCK	Q6P2M8	343 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	ADAMTSL4	Q6UY14	1074 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	CHSY3	Q70JA7	882 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	UBE2R2	Q712K3	238 aa	Predicted RBP	15	□□□□□ -0.01
DDX39A-209	ENST00000589318	GPR141	Q7Z602	305 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	ZNF547	Q8IVP9	402 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	CPSF7	Q8N684	471 aa	Known RBP	15	□□□□□ -0.01
DDX39A-209	ENST00000589318	POU5F2	Q8N7G0	328 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	OR56A4	Q8NGH8	313 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	ADAMTS16	Q8TE57	1224 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	TWIST2	Q8WVJ9	160 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	GLMN	Q92990	594 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	C19orf60	Q96EN9	201 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	ZNF382	Q96SR6	550 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	PARVB	Q9HBI1	364 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	FBXL12	Q9NXK8	326 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	GIN1	Q9NXP7	522 aa		15	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms