RNA–Protein interactions for RNA: ENST00000589228.5

PRKAR1A-217, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-217ENST00000589228 CACTIN-AS1Q8N1I8 211 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 UBE2J2Q8N2K1 259 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 SVOPLQ8N434 492 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 ZNF461Q8TAF7 563 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 Q96MT0 163 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 IL4I1Q96RQ9 567 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 WDR12Q9GZL7 423 aaKnown RBP11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 MRM3Q9HC36 420 aaKnown RBP11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 CCDC177Q9NQR7 707 aaPredicted RBP11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 SLC45A1Q9Y2W3 748 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 F5P12259 2224 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 NUP205Q92621 2012 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 MANBAO00462 879 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 GPR39O43194 453 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 XPNPEP2O43895 674 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 PCDH7O60245 1069 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 TFPTP0C1Z6 253 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 CAPN3P20807 821 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 RTP2Q5QGT7 225 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 CES5AQ6NT32 575 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 KIAA1324Q6UXG2 1013 aaKnown RBP11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 TMEM199Q8N511 208 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 SMYD1Q8NB12 490 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 STON2Q8WXE9 905 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 DPF3Q92784 378 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 KCNC2Q96PR1 638 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 DEPDC7Q96QD5 511 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 AIF1LQ9BQI0 150 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 RPF2Q9H7B2 306 aaKnown RBP11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 MBLAC1A4D2B0 266 aaPredicted RBP11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 A6NHS1 94 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 AP3D1O14617 1153 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 STATHP02808 62 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 GALTP07902 379 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 PABPC4LP0CB38 370 aaKnown RBP11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 DSC3Q14574 896 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 TAB1Q15750 504 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 CDC73Q6P1J9 531 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 MACC1Q6ZN28 852 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 RGL4Q8IZJ4 473 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 CXorf40BQ96DE9 158 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 SPRTNQ9H040 489 aaPredicted RBP11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 FLRT1Q9NZU1 646 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 NDOR1Q9UHB4 597 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 SPO11Q9Y5K1 396 aa11.8□□□□□ -0.52
PRKAR1A-217ENST00000589228 TBC1D3DA0A087WVF3 549 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 TBC1D3IA0A087WXS9 549 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 TBC1D3EA0A087X179 549 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 TBC1D3KA0A087X1G2 549 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 TBC1D3FA6NER0 549 aaPredicted RBP11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 TBC1D3LB9A6J9 549 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 NME4O00746 187 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 OR1F1O43749 312 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 NUDT14O95848 222 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 TBC1D3HP0C7X1 549 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 PRPS1L1P21108 318 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 IGFBP6P24592 240 aaPredicted RBP11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 DNAJB1P25685 340 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 PREPP48147 710 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 PSMD8P48556 350 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 EMX2Q04743 252 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 SNAPC1Q16533 368 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 ZSWIM7Q19AV6 140 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 CTC1Q2NKJ3 1217 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 PYDC2Q56P42 97 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 OGFRL1Q5TC84 451 aaPredicted RBP11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 TBC1D3GQ6DHY5 549 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 TBC1D3CQ6IPX1 549 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 TBC1D3Q8IZP1 549 aaPredicted RBP11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 PACRGLQ8N7B6 248 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 WDR48Q8TAF3 677 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 SMG7Q92540 1137 aaKnown RBP11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 MEAF6Q9HAF1 191 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 CRNNQ9UBG3 495 aaPredicted RBP11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 SSR3Q9UNL2 185 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 COQ6Q9Y2Z9 468 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 PRKAB1Q9Y478 270 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 GSAPA4D1B5 854 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 FADS2P1A8MWK0 482 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 ZNF99A8MXY4 864 aaPredicted RBP11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 SOCS2O14508 198 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 ADAMDEC1O15204 470 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 AOC2O75106 756 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 UGT2B17O75795 530 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 CD36P16671 472 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 MTAPQ13126 283 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 KCNAB2Q13303 367 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 GALNT10Q86SR1 603 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 TRIM74Q86UV6 250 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 PARGQ86W56 976 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 SLC43A3Q8NBI5 491 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 LRCH3Q96II8 777 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 CCM2LQ9NUG4 571 aaPredicted RBP11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 EURLQ9NYK6 297 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 FZD4Q9ULV1 537 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 C2orf78A6NCI8 922 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 M0QX08 132 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 CCNYL3P0C7X3 344 aa11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 PRDX3P30048 256 aaKnown RBP11.79□□□□□ -0.52
PRKAR1A-217ENST00000589228 SLBPQ14493 270 aaKnown RBP eCLIP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms