RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 A0A1B0GX78 115 aa13.44□□□□□ -0.26
VMP1-209ENST00000588915 CCDC78A2IDD5 438 aa13.44□□□□□ -0.26
VMP1-209ENST00000588915 GOLGA6L9A6NEM1 432 aa13.44□□□□□ -0.26
VMP1-209ENST00000588915 EDN3P14138 238 aa13.44□□□□□ -0.26
VMP1-209ENST00000588915 TPH1P17752 444 aa13.44□□□□□ -0.26
VMP1-209ENST00000588915 ALAS2P22557 587 aa13.44□□□□□ -0.26
VMP1-209ENST00000588915 PEBP1P30086 187 aaKnown RBP13.44□□□□□ -0.26
VMP1-209ENST00000588915 FOXN2P32314 431 aa13.44□□□□□ -0.26
VMP1-209ENST00000588915 PPARGP37231 505 aaPredicted RBP13.44□□□□□ -0.26
VMP1-209ENST00000588915 TSFMP43897 325 aaKnown RBP13.44□□□□□ -0.26
VMP1-209ENST00000588915 PER3P56645 1201 aa13.44□□□□□ -0.26
VMP1-209ENST00000588915 POU6F1Q14863 301 aa13.44□□□□□ -0.26
VMP1-209ENST00000588915 ZC3H12BQ5HYM0 836 aaKnown RBP13.44□□□□□ -0.26
VMP1-209ENST00000588915 CRYBG3Q68DQ2 2970 aa13.44□□□□□ -0.26
VMP1-209ENST00000588915 FCRL6Q6DN72 434 aa13.44□□□□□ -0.26
VMP1-209ENST00000588915 MCATQ8IVS2 390 aaKnown RBP13.44□□□□□ -0.26
VMP1-209ENST00000588915 TC2NQ8N9U0 490 aa13.44□□□□□ -0.26
VMP1-209ENST00000588915 DNAJB14Q8TBM8 379 aa13.44□□□□□ -0.26
VMP1-209ENST00000588915 ZBTB20Q9HC78 741 aaPredicted RBP13.44□□□□□ -0.26
VMP1-209ENST00000588915 SLC6A20Q9NP91 592 aa13.44□□□□□ -0.26
VMP1-209ENST00000588915 SEMA3GQ9NS98 782 aa13.44□□□□□ -0.26
VMP1-209ENST00000588915 RIMKLBQ9ULI2 386 aa13.44□□□□□ -0.26
VMP1-209ENST00000588915 PCM1Q15154 2024 aa13.44□□□□□ -0.26
VMP1-209ENST00000588915 ERI2A8K979 691 aaKnown RBP13.43□□□□□ -0.26
VMP1-209ENST00000588915 BTNL10A8MVZ5 291 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 DSCR3O14972 297 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 METTL18O95568 372 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 S1PR4O95977 384 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 CTSBP07858 339 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 ITGAXP20702 1163 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 MAGP20916 626 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 CD9P21926 228 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 PKLRP30613 574 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 GRM7Q14831 915 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 SLC9A5Q14940 896 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 BRD3Q15059 726 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 NKG7Q16617 165 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 SKOR2Q2VWA4 1001 aaPredicted RBP13.43□□□□□ -0.26
VMP1-209ENST00000588915 FAM214AQ32MH5 1076 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 SYTL3Q4VX76 610 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 TTLL10Q6ZVT0 673 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 CNTRLQ7Z7A1 2325 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 SLC22A15Q8IZD6 547 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 FAR1Q8WVX9 515 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 ASZ1Q8WWH4 475 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 ZUFSPQ96AP4 578 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 ZNF285Q96NJ3 590 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 LMF1Q96S06 567 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 SPSB2Q99619 263 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 MENTQ9BUN1 341 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 CARD6Q9BX69 1037 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 TSSK1BQ9BXA7 367 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 LHPPQ9H008 270 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 EPS8L2Q9H6S3 715 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 CDC23Q9UJX2 597 aa13.43□□□□□ -0.26
VMP1-209ENST00000588915 NOVA2Q9UNW9 492 aaKnown RBP13.43□□□□□ -0.26
VMP1-209ENST00000588915 EPN1Q9Y6I3 576 aaPredicted RBP13.43□□□□□ -0.26
VMP1-209ENST00000588915 CCDC162PA2VCL2 907 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 TARM1B6A8C7 271 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 SOCS6O14544 535 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 SRPX2O60687 465 aaPredicted RBP13.42□□□□□ -0.26
VMP1-209ENST00000588915 GPC4O75487 556 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 GAS8O95995 478 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 CDH17Q12864 832 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 ZNF169Q14929 603 aaPredicted RBP13.42□□□□□ -0.26
VMP1-209ENST00000588915 TLR1Q15399 786 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 RPUSD3Q6P087 351 aaKnown RBP13.42□□□□□ -0.26
VMP1-209ENST00000588915 KIRREL2Q6UWL6 708 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 UNC5DQ6UXZ4 953 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 DCUN1D3Q8IWE4 304 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 FAM71DQ8N9W8 422 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 LINC01555Q8NAE3 123 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 OR2L8Q8NGY9 312 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 PEX13Q92968 403 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 MRFAP1L1Q96HT8 127 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 FAM118BQ9BPY3 351 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 CUTCQ9NTM9 273 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.42□□□□□ -0.26
VMP1-209ENST00000588915 FBXL4Q9UKA2 621 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 TFR2Q9UP52 801 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 ENTPD4Q9Y227 616 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 HS3ST3B1Q9Y662 390 aa13.42□□□□□ -0.26
VMP1-209ENST00000588915 MDC1Q14676 2089 aaKnown RBP13.42□□□□□ -0.26
VMP1-209ENST00000588915 DOCK10Q96BY6 2186 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 HEATR9A2RTY3 570 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 FITM1A5D6W6 292 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 VSTM2BA6NLU5 285 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 MASP2O00187 686 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 LRRTM2O43300 516 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 CARSP49589 748 aaKnown RBP13.41□□□□□ -0.26
VMP1-209ENST00000588915 NAP1L1P55209 391 aaKnown RBP13.41□□□□□ -0.26
VMP1-209ENST00000588915 ACVR1Q04771 509 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 SF1Q15637 639 aaKnown RBP13.41□□□□□ -0.26
VMP1-209ENST00000588915 TUBB8Q3ZCM7 444 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 C1QL3Q5VWW1 255 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 FIGLAQ6QHK4 219 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 AFTPHQ6ULP2 937 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 NLRP9Q7RTR0 991 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 TTC29Q8NA56 475 aaPredicted RBP13.41□□□□□ -0.26
VMP1-209ENST00000588915 ALG3Q92685 438 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms