RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 C16orf46Q6P387 395 aa16.46■□□□□ 0.23
SCAMP4-211ENST00000588907 SYTL1Q8IYJ3 562 aa16.46■□□□□ 0.23
SCAMP4-211ENST00000588907 TMEM151AQ8N4L1 468 aa16.46■□□□□ 0.23
SCAMP4-211ENST00000588907 OR2L8Q8NGY9 312 aa16.46■□□□□ 0.23
SCAMP4-211ENST00000588907 OR10G6Q8NH81 332 aa16.46■□□□□ 0.23
SCAMP4-211ENST00000588907 UBTD2Q8WUN7 234 aa16.46■□□□□ 0.23
SCAMP4-211ENST00000588907 EXT2Q93063 718 aa16.46■□□□□ 0.23
SCAMP4-211ENST00000588907 RHBDF1Q96CC6 855 aa16.46■□□□□ 0.23
SCAMP4-211ENST00000588907 CNDP2Q96KP4 475 aaKnown RBP16.46■□□□□ 0.23
SCAMP4-211ENST00000588907 WWOXQ9NZC7 414 aa16.46■□□□□ 0.23
SCAMP4-211ENST00000588907 STOX2Q9P2F5 926 aaPredicted RBP16.46■□□□□ 0.23
SCAMP4-211ENST00000588907 ENTPD2Q9Y5L3 495 aa16.46■□□□□ 0.23
SCAMP4-211ENST00000588907 RNF215Q9Y6U7 377 aa16.46■□□□□ 0.23
SCAMP4-211ENST00000588907 UBXN8O00124 270 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 PPM1DO15297 605 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 BIRC5O15392 142 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 H2AFYO75367 372 aaKnown RBP16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 FKBP9O95302 570 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 MTHFD2P13995 350 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 IMPA1P29218 277 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 ETV4P43268 484 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 PIK3CGP48736 1102 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 PRKAA1Q13131 559 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 NAA25Q14CX7 972 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 SETDB1Q15047 1291 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 CLPPQ16740 277 aaPredicted RBP16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 CAPN13Q6MZZ7 669 aaPredicted RBP16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 OOSP2Q86WS3 158 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 ARMC2Q8NEN0 867 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 WDR48Q8TAF3 677 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 NETO1Q8TDF5 533 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 ZNF480Q8WV37 535 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 SMPDL3AQ92484 453 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 MENTQ9BUN1 341 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 CCDC177Q9NQR7 707 aaPredicted RBP16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 RXFP3Q9NSD7 469 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 KCNK4Q9NYG8 393 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 PTBP2Q9UKA9 531 aaKnown RBP16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 ICKQ9UPZ9 632 aa16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 GOLGA4Q13439 2230 aaKnown RBP16.45■□□□□ 0.22
SCAMP4-211ENST00000588907 NCF1BA6NI72 391 aaPredicted RBP16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 NCF1CA8MVU1 366 aaPredicted RBP16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 DUX1O43812 170 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 GFRA3O60609 400 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 UBXN7O94888 489 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 NCF1P14598 390 aaPredicted RBP16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 ACP1P24666 158 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 KCNC1P48547 511 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 DNAJB13P59910 316 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 KIR2DS3Q14952 304 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 PFKFB4Q16877 469 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 CCSMST1Q4G0I0 132 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 HHATQ5VTY9 493 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 LIPMQ5VYY2 423 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 ARMC6Q6NXE6 501 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 AGTRAPQ6RW13 159 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 LRRC70Q7Z2Q7 622 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 SPNS2Q8IVW8 549 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 KLHDC8AQ8IYD2 350 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 OR56A3Q8NH54 315 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 DENND1AQ8TEH3 1009 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 AHCYL2Q96HN2 611 aaKnown RBP16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 MIPEPQ99797 713 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 DPYSL5Q9BPU6 564 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 C1QTNF3Q9BXJ4 246 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 CAPS2Q9BXY5 557 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 SLC17A7Q9P2U7 560 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 BTBD3Q9Y2F9 522 aa16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 EP300Q09472 2414 aaPredicted RBP16.44■□□□□ 0.22
SCAMP4-211ENST00000588907 ANKRD12Q6UB98 2062 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 LY6G6EA0A0G2JKS1 128 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 A8MT66 165 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 C2orf74A8MZ97 194 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 E7ENX8 843 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 G3V2L1 256 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 TNFSF14O43557 240 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 STK16O75716 305 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 CCNDBP1O95273 360 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 SBK3P0C264 359 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 DHRS4L1P0CG22 281 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 AMD1P17707 334 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 CAPZBP47756 277 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 SERPINB4P48594 390 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 TBPL1P62380 186 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 HERVK_113P63132 956 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 TAP2Q03519 686 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 ILKQ13418 452 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 PCBP2Q15366 365 aaKnown RBP eCLIP16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 EFL1Q7Z2Z2 1120 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 SFTPA2Q8IWL1 248 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 TRIM42Q8IWZ5 723 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 PTGR2Q8N8N7 351 aaPredicted RBP16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 ANKRD42Q8N9B4 389 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 OR4E2Q8NGC2 313 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 BAHD1Q8TBE0 780 aaPredicted RBP16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 CCDC74AQ96AQ1 378 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 PHOX2BQ99453 314 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 HAUS8Q9BT25 410 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 ERVK-6Q9BXR3 956 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 RAB33BQ9H082 229 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms