RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 HACD2Q6Y1H2 254 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 RNF165Q6ZSG1 346 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 Q6ZSR9 355 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 GJD3Q8N144 294 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 PCYOX1LQ8NBM8 494 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 HIPK4Q8NE63 616 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 ATL1Q8WXF7 558 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 KLK6Q92876 244 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 PYCR2Q96C36 320 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 MED8Q96G25 268 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 COX14Q96I36 57 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 SLC45A3Q96JT2 553 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 ZNF514Q96K75 400 aaPredicted RBP8.53□□□□□ -1.04
SMAD4-206ENST00000588860 PPP3R2Q96LZ3 170 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 CCDC138Q96M89 665 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 PKP4Q99569 1192 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 BRINP2Q9C0B6 783 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 SLC6A17Q9H1V8 727 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 HEBP1Q9NRV9 189 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 FARSBQ9NSD9 589 aaKnown RBP8.53□□□□□ -1.04
SMAD4-206ENST00000588860 ZIM2Q9NZV7 527 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 STOX2Q9P2F5 926 aaPredicted RBP8.53□□□□□ -1.04
SMAD4-206ENST00000588860 CIDEBQ9UHD4 219 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 ZNHIT2Q9UHR6 403 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 ANGPTL2Q9UKU9 493 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 POMPQ9Y244 141 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 SLC22A14Q9Y267 594 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 NDUFAF1Q9Y375 327 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 PCDHGA7Q9Y5G6 932 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 F5P12259 2224 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 LRP4O75096 1905 aa8.52□□□□□ -1.04
SMAD4-206ENST00000588860 ZFHX2Q9C0A1 2572 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-206ENST00000588860 KCNE1BA0A087WTH5 132 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 C2CD4DB7Z1M9 353 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 E7ENX8 843 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 H3BQ06 376 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-206ENST00000588860 TRIM38O00635 465 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 CLGNO14967 610 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 RNGTTO60942 597 aaKnown RBP8.52□□□□□ -1.05
SMAD4-206ENST00000588860 ADAM23O75077 832 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 FKBP6O75344 327 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 ULK1O75385 1050 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 ANP32DO95626 131 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 PDYNP01213 254 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 DNTTP04053 509 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 HOXB2P14652 356 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 SLC2A4P14672 509 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 XRCC1P18887 633 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-206ENST00000588860 CAPN3P20807 821 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 ME2P23368 584 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 HALP42357 657 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 POLR2JP52435 117 aaKnown RBP8.52□□□□□ -1.05
SMAD4-206ENST00000588860 PFN3P60673 137 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 AP2B1P63010 937 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 RPL38P63173 70 aaKnown RBP8.52□□□□□ -1.05
SMAD4-206ENST00000588860 CDK3Q00526 305 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 GRIK2Q13002 908 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 NAE1Q13564 534 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 CEACAM7Q14002 265 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 NFE2L1Q14494 772 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 IRF4Q15306 451 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 CPSF6Q16630 551 aaKnown RBP eCLIP8.52□□□□□ -1.05
SMAD4-206ENST00000588860 ZXDCQ2QGD7 858 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-206ENST00000588860 AP5B1Q2VPB7 878 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 VPS26BQ4G0F5 336 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 CCSMST1Q4G0I0 132 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 GGTA1PQ4G0N0 100 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 TMEM196Q5HYL7 178 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 IL23RQ5VWK5 629 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 NEK5Q6P3R8 708 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 BLOC1S3Q6QNY0 202 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 AGTRAPQ6RW13 159 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 FAM83HQ6ZRV2 1179 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-206ENST00000588860 ERMP1Q7Z2K6 904 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 TRMT11Q7Z4G4 463 aaKnown RBP8.52□□□□□ -1.05
SMAD4-206ENST00000588860 LRRTM4Q86VH4 590 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 RETREG3Q86VR2 466 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 THOC6Q86W42 341 aaKnown RBP8.52□□□□□ -1.05
SMAD4-206ENST00000588860 ZNF547Q8IVP9 402 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 HOMEZQ8IX15 550 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 KLHDC8AQ8IYD2 350 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 L3MBTL4Q8NA19 623 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 HM13Q8TCT9 377 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 SLC26A7Q8TE54 656 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 JADE3Q92613 823 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 USP7Q93009 1102 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 ZNF775Q96BV0 537 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-206ENST00000588860 ROPN1LQ96C74 230 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 MTFMTQ96DP5 389 aaKnown RBP8.52□□□□□ -1.05
SMAD4-206ENST00000588860 SPDL1Q96EA4 605 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 LINC00615Q96LM1 132 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-206ENST00000588860 MAGEB10Q96LZ2 347 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-206ENST00000588860 GABRG3Q99928 467 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 TACO1Q9BSH4 297 aaKnown RBP8.52□□□□□ -1.05
SMAD4-206ENST00000588860 ELOVL6Q9H5J4 265 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 FBRSQ9HAH7 460 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 IL1RL2Q9HB29 575 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 LRTM1Q9HBL6 345 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 FBXL12Q9NXK8 326 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 CROTQ9UKG9 612 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms