RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 WDR54Q9H977 334 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 LRRC40Q9H9A6 602 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 ATP13A2Q9NQ11 1180 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 KLHL20Q9Y2M5 609 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 TDRKHQ9Y2W6 561 aaKnown RBP17.7■□□□□ 0.42
CCDC43-204ENST00000588687 HS3ST3B1Q9Y662 390 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 DCHS2Q6V1P9 2916 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 SVILO95425 2214 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 ANKRD17O75179 2603 aaKnown RBP17.69■□□□□ 0.42
CCDC43-204ENST00000588687 PDZD2O15018 2839 aa17.69■□□□□ 0.42
CCDC43-204ENST00000588687 A0A1B0GX78 115 aa17.69■□□□□ 0.42
CCDC43-204ENST00000588687 QSOX1O00391 747 aa17.69■□□□□ 0.42
CCDC43-204ENST00000588687 GDF10P55107 478 aa17.69■□□□□ 0.42
CCDC43-204ENST00000588687 HIF1AQ16665 826 aa17.69■□□□□ 0.42
CCDC43-204ENST00000588687 PARP6Q2NL67 630 aa17.69■□□□□ 0.42
CCDC43-204ENST00000588687 PRAMEF13Q5VWM6 474 aa17.69■□□□□ 0.42
CCDC43-204ENST00000588687 KCNMB4Q86W47 210 aa17.69■□□□□ 0.42
CCDC43-204ENST00000588687 TMTC1Q8IUR5 882 aa17.69■□□□□ 0.42
CCDC43-204ENST00000588687 VRK3Q8IV63 474 aa17.69■□□□□ 0.42
CCDC43-204ENST00000588687 LMNTD1Q8N9Z9 388 aa17.69■□□□□ 0.42
CCDC43-204ENST00000588687 TTC13Q8NBP0 860 aa17.69■□□□□ 0.42
CCDC43-204ENST00000588687 ZNF285Q96NJ3 590 aa17.69■□□□□ 0.42
CCDC43-204ENST00000588687 NDC1Q9BTX1 674 aa17.69■□□□□ 0.42
CCDC43-204ENST00000588687 ADGRG4Q8IZF6 3080 aa17.68■□□□□ 0.42
CCDC43-204ENST00000588687 ZGRF1Q86YA3 2104 aa17.68■□□□□ 0.42
CCDC43-204ENST00000588687 CCDC78A2IDD5 438 aa17.68■□□□□ 0.42
CCDC43-204ENST00000588687 CCDC162PA2VCL2 907 aa17.68■□□□□ 0.42
CCDC43-204ENST00000588687 OR1I1O60431 355 aa17.68■□□□□ 0.42
CCDC43-204ENST00000588687 RAB28P51157 221 aa17.68■□□□□ 0.42
CCDC43-204ENST00000588687 NKG7Q16617 165 aa17.68■□□□□ 0.42
CCDC43-204ENST00000588687 KIRREL2Q6UWL6 708 aa17.68■□□□□ 0.42
CCDC43-204ENST00000588687 OVCH1Q7RTY7 1134 aa17.68■□□□□ 0.42
CCDC43-204ENST00000588687 SLC22A15Q8IZD6 547 aa17.68■□□□□ 0.42
CCDC43-204ENST00000588687 LRRC57Q8N9N7 239 aa17.68■□□□□ 0.42
CCDC43-204ENST00000588687 FAM71DQ8N9W8 422 aa17.68■□□□□ 0.42
CCDC43-204ENST00000588687 LKAAEAR1Q8TD35 194 aa17.68■□□□□ 0.42
CCDC43-204ENST00000588687 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.68■□□□□ 0.42
CCDC43-204ENST00000588687 MESP1Q9BRJ9 268 aa17.68■□□□□ 0.42
CCDC43-204ENST00000588687 CTSFQ9UBX1 484 aa17.68■□□□□ 0.42
CCDC43-204ENST00000588687 DUSP10Q9Y6W6 482 aa17.68■□□□□ 0.42
CCDC43-204ENST00000588687 ISM1B1AKI9 464 aa17.67■□□□□ 0.42
CCDC43-204ENST00000588687 TJP3O95049 919 aa17.67■□□□□ 0.42
CCDC43-204ENST00000588687 ALBP02768 609 aa17.67■□□□□ 0.42
CCDC43-204ENST00000588687 MCM3P25205 808 aa17.67■□□□□ 0.42
CCDC43-204ENST00000588687 ITGA3P26006 1051 aa17.67■□□□□ 0.42
CCDC43-204ENST00000588687 TSFMP43897 325 aaKnown RBP17.67■□□□□ 0.42
CCDC43-204ENST00000588687 GLRBP48167 497 aa17.67■□□□□ 0.42
CCDC43-204ENST00000588687 RWDD2BP57060 319 aa17.67■□□□□ 0.42
CCDC43-204ENST00000588687 PLOD1Q02809 727 aaPredicted RBP17.67■□□□□ 0.42
CCDC43-204ENST00000588687 Q0VFX4 171 aa17.67■□□□□ 0.42
CCDC43-204ENST00000588687 KLF1Q13351 362 aaPredicted RBP17.67■□□□□ 0.42
CCDC43-204ENST00000588687 SYTL3Q4VX76 610 aa17.67■□□□□ 0.42
CCDC43-204ENST00000588687 CCDC38Q502W7 563 aa17.67■□□□□ 0.42
CCDC43-204ENST00000588687 FCRL6Q6DN72 434 aa17.67■□□□□ 0.42
CCDC43-204ENST00000588687 ARHGEF18Q6ZSZ5 1173 aa17.67■□□□□ 0.42
CCDC43-204ENST00000588687 TTLL10Q6ZVT0 673 aa17.67■□□□□ 0.42
CCDC43-204ENST00000588687 CCDC170Q8IYT3 715 aa17.67■□□□□ 0.42
CCDC43-204ENST00000588687 DTWD1Q8N5C7 304 aa17.67■□□□□ 0.42
CCDC43-204ENST00000588687 DLG3Q92796 817 aa17.67■□□□□ 0.42
CCDC43-204ENST00000588687 REXO2Q9Y3B8 237 aaKnown RBP17.67■□□□□ 0.42
CCDC43-204ENST00000588687 TACC2O95359 2948 aa17.66■□□□□ 0.42
CCDC43-204ENST00000588687 DSCR3O14972 297 aa17.66■□□□□ 0.42
CCDC43-204ENST00000588687 GPC4O75487 556 aa17.66■□□□□ 0.42
CCDC43-204ENST00000588687 ZNF189O75820 626 aaPredicted RBP17.66■□□□□ 0.42
CCDC43-204ENST00000588687 MED26O95402 600 aa17.66■□□□□ 0.42
CCDC43-204ENST00000588687 CCR7P32248 378 aa17.66■□□□□ 0.42
CCDC43-204ENST00000588687 ACVR1Q04771 509 aa17.66■□□□□ 0.42
CCDC43-204ENST00000588687 ELOAQ14241 798 aaKnown RBP17.66■□□□□ 0.42
CCDC43-204ENST00000588687 DNAJC21Q5F1R6 531 aaKnown RBP17.66■□□□□ 0.42
CCDC43-204ENST00000588687 ZNF534Q76KX8 674 aa17.66■□□□□ 0.42
CCDC43-204ENST00000588687 MCATQ8IVS2 390 aaKnown RBP17.66■□□□□ 0.42
CCDC43-204ENST00000588687 SLC35B2Q8TB61 432 aa17.66■□□□□ 0.42
CCDC43-204ENST00000588687 GRHL3Q8TE85 626 aa17.66■□□□□ 0.42
CCDC43-204ENST00000588687 IL17FQ96PD4 163 aa17.66■□□□□ 0.42
CCDC43-204ENST00000588687 SLX1AQ9BQ83 275 aa17.66■□□□□ 0.42
CCDC43-204ENST00000588687 LUC7LQ9NQ29 371 aaKnown RBP17.66■□□□□ 0.42
CCDC43-204ENST00000588687 AGPAT4Q9NRZ5 378 aa17.66■□□□□ 0.42
CCDC43-204ENST00000588687 IRAK4Q9NWZ3 460 aa17.66■□□□□ 0.42
CCDC43-204ENST00000588687 IMPACTQ9P2X3 320 aa17.66■□□□□ 0.42
CCDC43-204ENST00000588687 SLC2A6Q9UGQ3 507 aa17.66■□□□□ 0.42
CCDC43-204ENST00000588687 CDC23Q9UJX2 597 aa17.66■□□□□ 0.42
CCDC43-204ENST00000588687 R3HDM2Q9Y2K5 976 aaKnown RBP17.66■□□□□ 0.42
CCDC43-204ENST00000588687 GRID2IPA4D2P6 1211 aa17.65■□□□□ 0.42
CCDC43-204ENST00000588687 FITM1A5D6W6 292 aa17.65■□□□□ 0.42
CCDC43-204ENST00000588687 VSTM2BA6NLU5 285 aa17.65■□□□□ 0.42
CCDC43-204ENST00000588687 BTNL10A8MVZ5 291 aa17.65■□□□□ 0.42
CCDC43-204ENST00000588687 PRICKLE3O43900 615 aaPredicted RBP17.65■□□□□ 0.42
CCDC43-204ENST00000588687 OR56A5P0C7T3 313 aa17.65■□□□□ 0.42
CCDC43-204ENST00000588687 CD9P21926 228 aa17.65■□□□□ 0.42
CCDC43-204ENST00000588687 TNFRSF8P28908 595 aa17.65■□□□□ 0.42
CCDC43-204ENST00000588687 ARSFP54793 590 aa17.65■□□□□ 0.42
CCDC43-204ENST00000588687 SEMA3AQ14563 771 aa17.65■□□□□ 0.42
CCDC43-204ENST00000588687 P3H1Q32P28 736 aa17.65■□□□□ 0.42
CCDC43-204ENST00000588687 B3GNTL1Q67FW5 361 aaPredicted RBP17.65■□□□□ 0.42
CCDC43-204ENST00000588687 RNF214Q8ND24 703 aa17.65■□□□□ 0.42
CCDC43-204ENST00000588687 OR11G2Q8NGC1 345 aa17.65■□□□□ 0.42
CCDC43-204ENST00000588687 LRRC45Q96CN5 670 aa17.65■□□□□ 0.42
CCDC43-204ENST00000588687 ZNF778Q96MU6 729 aa17.65■□□□□ 0.42
CCDC43-204ENST00000588687 TRIM56Q9BRZ2 755 aaKnown RBP17.65■□□□□ 0.42
CCDC43-204ENST00000588687 MRM3Q9HC36 420 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms