RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 LDB1Q86U70 411 aaPredicted RBP13.19□□□□□ -0.3
HDAC5-208ENST00000588419 VRK3Q8IV63 474 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 KLHDC8BQ8IXV7 354 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 KRT222Q8N1A0 295 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 ZADH2Q8N4Q0 377 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 OR2Y1Q8NGV0 311 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 FLVCR1-AS1Q8TAF5 88 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 SKA2Q8WVK7 121 aaPredicted RBP13.19□□□□□ -0.3
HDAC5-208ENST00000588419 DESI2Q9BSY9 194 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 TSSK1BQ9BXA7 367 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 CUEDC1Q9NWM3 386 aaPredicted RBP13.19□□□□□ -0.3
HDAC5-208ENST00000588419 EURLQ9NYK6 297 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 C5AR2Q9P296 337 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 ZGRF1Q86YA3 2104 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 A0A0U1RQJ8 604 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 BTNL10A8MVZ5 291 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 F8W8V4 182 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 H3BMH7 237 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 IGHEP01854 428 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 UMODP07911 640 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 MCM3P25205 808 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 CCR7P32248 378 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 GRIA3P42263 894 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 RAB28P51157 221 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 SEMA3AQ14563 771 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 FASTKD1Q53R41 847 aaKnown RBP13.18□□□□□ -0.3
HDAC5-208ENST00000588419 TSTD2Q5T7W7 516 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 SEL1L2Q5TEA6 688 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 PRUNE1Q86TP1 453 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 SYCE1Q8N0S2 351 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 DNAJC22Q8N4W6 341 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 OTUD6BQ8N6M0 293 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 OR13J1Q8NGT2 312 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.18□□□□□ -0.3
HDAC5-208ENST00000588419 TM9SF4Q92544 642 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 DLG3Q92796 817 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 PTERQ96BW5 349 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 CNDP1Q96KN2 507 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 SOX17Q9H6I2 414 aaPredicted RBP13.18□□□□□ -0.3
HDAC5-208ENST00000588419 ZNF552Q9H707 407 aaPredicted RBP13.18□□□□□ -0.3
HDAC5-208ENST00000588419 ETNK1Q9HBU6 452 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 ZBTB20Q9HC78 741 aaPredicted RBP13.18□□□□□ -0.3
HDAC5-208ENST00000588419 FBXL4Q9UKA2 621 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 SLC39A10Q9ULF5 831 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 CROCCQ5TZA2 2017 aa13.18□□□□□ -0.3
HDAC5-208ENST00000588419 SVILO95425 2214 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 A0A1B0GX78 115 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 ANKUB1A6NFN9 424 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 MIF4GDA9UHW6 222 aaKnown RBP13.17□□□□□ -0.3
HDAC5-208ENST00000588419 IPO13O94829 963 aaKnown RBP13.17□□□□□ -0.3
HDAC5-208ENST00000588419 RPN2P04844 631 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 APOA4P06727 396 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 CD63P08962 238 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 GRIA1P42261 906 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 BDKRB1P46663 353 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 PLOD1Q02809 727 aaPredicted RBP13.17□□□□□ -0.3
HDAC5-208ENST00000588419 KLF1Q13351 362 aaPredicted RBP13.17□□□□□ -0.3
HDAC5-208ENST00000588419 SNX1Q13596 522 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 TMED2Q15363 201 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 SF1Q15637 639 aaKnown RBP13.17□□□□□ -0.3
HDAC5-208ENST00000588419 HIF1AQ16665 826 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 DNAJC21Q5F1R6 531 aaKnown RBP13.17□□□□□ -0.3
HDAC5-208ENST00000588419 IRAK1BP1Q5VVH5 260 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 ZNF787Q6DD87 383 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 MRPL14Q6P1L8 145 aaKnown RBP13.17□□□□□ -0.3
HDAC5-208ENST00000588419 MCATQ8IVS2 390 aaKnown RBP13.17□□□□□ -0.3
HDAC5-208ENST00000588419 DCUN1D3Q8IWE4 304 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 SLC22A15Q8IZD6 547 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 TTC29Q8NA56 475 aaPredicted RBP13.17□□□□□ -0.3
HDAC5-208ENST00000588419 PPHLN1Q8NEY8 458 aaKnown RBP13.17□□□□□ -0.3
HDAC5-208ENST00000588419 OR4L1Q8NH43 312 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 GSDMBQ8TAX9 411 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 SLC35B2Q8TB61 432 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 INPP5DQ92835 1189 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 ZNF778Q96MU6 729 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 SLC6A20Q9NP91 592 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 ATP13A2Q9NQ11 1180 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 INTS7Q9NVH2 962 aaKnown RBP13.17□□□□□ -0.3
HDAC5-208ENST00000588419 ERRFI1Q9UJM3 462 aaPredicted RBP13.17□□□□□ -0.3
HDAC5-208ENST00000588419 ANAPC5Q9UJX4 755 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 CSAG2Q9Y5P2 127 aa13.17□□□□□ -0.3
HDAC5-208ENST00000588419 COPG1Q9Y678 874 aaKnown RBP13.17□□□□□ -0.3
HDAC5-208ENST00000588419 HEATR5BQ9P2D3 2071 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 KRT87PA6NCN2 255 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 AGPSO00116 658 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 KLHL41O60662 606 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 DDAH2O95865 285 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 ETS1P14921 441 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 CD9P21926 228 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 PSMB5P28074 263 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 ARSFP54793 590 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 KIF5AQ12840 1032 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 RBBP7Q16576 425 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 PTRHD1Q6GMV3 140 aaKnown RBP13.16□□□□□ -0.3
HDAC5-208ENST00000588419 PARP9Q8IXQ6 854 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 PRSS58Q8IYP2 241 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 DTWD1Q8N5C7 304 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 LINC01555Q8NAE3 123 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 C5orf34Q96MH7 638 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 BAG1Q99933 345 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms