RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 VRK3Q8IV63 474 aa13.61□□□□□ -0.23
ERCC1-205ENST00000587888 UBL4BQ8N7F7 174 aa13.61□□□□□ -0.23
ERCC1-205ENST00000587888 OR6P1Q8NGX9 317 aa13.61□□□□□ -0.23
ERCC1-205ENST00000587888 TM9SF4Q92544 642 aa13.61□□□□□ -0.23
ERCC1-205ENST00000587888 DLG3Q92796 817 aa13.61□□□□□ -0.23
ERCC1-205ENST00000587888 CDC23Q9UJX2 597 aa13.61□□□□□ -0.23
ERCC1-205ENST00000587888 USP9YO00507 2555 aaPredicted RBP13.61□□□□□ -0.23
ERCC1-205ENST00000587888 LRRK2Q5S007 2527 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 F8W8V4 182 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 FTCDO95954 541 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 CD9P21926 228 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 PSMA3P25788 255 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 PKLRP30613 574 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 RAB28P51157 221 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 ARSFP54793 590 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 CDH17Q12864 832 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 AIMP2Q13155 320 aaKnown RBP13.6□□□□□ -0.23
ERCC1-205ENST00000587888 SF1Q15637 639 aaKnown RBP13.6□□□□□ -0.23
ERCC1-205ENST00000587888 HIF1AQ16665 826 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 DNAJC21Q5F1R6 531 aaKnown RBP13.6□□□□□ -0.23
ERCC1-205ENST00000587888 TSTD2Q5T7W7 516 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 PPP1R21Q6ZMI0 780 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 KIAA1328Q86T90 577 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 CUZD1Q86UP6 607 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 LINC01555Q8NAE3 123 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 OR13J1Q8NGT2 312 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 OR4L1Q8NH43 312 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 SLC35B2Q8TB61 432 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.6□□□□□ -0.23
ERCC1-205ENST00000587888 INPP5DQ92835 1189 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 C5orf34Q96MH7 638 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 ZNF778Q96MU6 729 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 IL17FQ96PD4 163 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 ETNK1Q9HBU6 452 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 FBXL4Q9UKA2 621 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 SLC5A6Q9Y289 635 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 FER1L5A0AVI2 2057 aa13.6□□□□□ -0.23
ERCC1-205ENST00000587888 SEC16AO15027 2179 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 HEATR9A2RTY3 570 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 WIPF3A6NGB9 483 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 E7EVH7 732 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 LDLRP01130 860 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 PIM1P11309 404 aaPredicted RBP13.59□□□□□ -0.23
ERCC1-205ENST00000587888 ITGAXP20702 1163 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 MCM3P25205 808 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 GRIA1P42261 906 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 SOX8P57073 446 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 KLF1Q13351 362 aaPredicted RBP13.59□□□□□ -0.23
ERCC1-205ENST00000587888 SEMA3AQ14563 771 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 FASTKD1Q53R41 847 aaKnown RBP13.59□□□□□ -0.23
ERCC1-205ENST00000587888 CRB2Q5IJ48 1285 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 PRAMEF13Q5VWM6 474 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 FCRL6Q6DN72 434 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 FIGLAQ6QHK4 219 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 AFTPHQ6ULP2 937 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 Q6ZS92 163 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 OVCH1Q7RTY7 1134 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 LDB1Q86U70 411 aaPredicted RBP13.59□□□□□ -0.23
ERCC1-205ENST00000587888 PARP9Q8IXQ6 854 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 SLC22A15Q8IZD6 547 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 KRT222Q8N1A0 295 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 DNAJB14Q8TBM8 379 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 ATG4AQ8WYN0 398 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 SLC22A18Q96BI1 424 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 TSSK1BQ9BXA7 367 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 SOX17Q9H6I2 414 aaPredicted RBP13.59□□□□□ -0.23
ERCC1-205ENST00000587888 SLC6A20Q9NP91 592 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 SLC39A10Q9ULF5 831 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 NTNG1Q9Y2I2 539 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 CSAG2Q9Y5P2 127 aa13.59□□□□□ -0.23
ERCC1-205ENST00000587888 SPENQ96T58 3664 aaKnown RBP13.59□□□□□ -0.23
ERCC1-205ENST00000587888 USP9XQ93008 2570 aaPredicted RBP13.59□□□□□ -0.23
ERCC1-205ENST00000587888 A0A1B0GX78 115 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 MIF4GDA9UHW6 222 aaKnown RBP13.58□□□□□ -0.24
ERCC1-205ENST00000587888 IFNB1P01574 187 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 APOA4P06727 396 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 MMP11P24347 488 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 ADRA1DP25100 572 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 PPARGP37231 505 aaPredicted RBP13.58□□□□□ -0.24
ERCC1-205ENST00000587888 DCTP40126 519 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 OR1D4P47884 311 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 ZNF75DP51815 510 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 PRAMEP78395 509 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 NKG7Q16617 165 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 ZC3H12BQ5HYM0 836 aaKnown RBP13.58□□□□□ -0.24
ERCC1-205ENST00000587888 PRUNE1Q86TP1 453 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 SYCE1Q8N0S2 351 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 METTL27Q8N6F8 245 aaPredicted RBP13.58□□□□□ -0.24
ERCC1-205ENST00000587888 LKAAEAR1Q8TD35 194 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 DENND1AQ8TEH3 1009 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 ASZ1Q8WWH4 475 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 MENTQ9BUN1 341 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 CARD6Q9BX69 1037 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 AGPAT4Q9NRZ5 378 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 CUTCQ9NTM9 273 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 INTS7Q9NVH2 962 aaKnown RBP13.58□□□□□ -0.24
ERCC1-205ENST00000587888 ANAPC5Q9UJX4 755 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 PCDHGA10Q9Y5H3 936 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 MAU2Q9Y6X3 613 aa13.58□□□□□ -0.24
ERCC1-205ENST00000587888 A0A0U1RQJ8 604 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms