RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 FAM83EQ2M2I3 478 aa18.55■□□□□ 0.56
DDX39A-204ENST00000586558 SBSNQ6UWP8 590 aa18.55■□□□□ 0.56
DDX39A-204ENST00000586558 TIFABQ6ZNK6 161 aa18.55■□□□□ 0.56
DDX39A-204ENST00000586558 ARHGAP22Q7Z5H3 698 aa18.55■□□□□ 0.56
DDX39A-204ENST00000586558 LINC01555Q8NAE3 123 aa18.55■□□□□ 0.56
DDX39A-204ENST00000586558 IL17FQ96PD4 163 aa18.55■□□□□ 0.56
DDX39A-204ENST00000586558 PKP4Q99569 1192 aa18.55■□□□□ 0.56
DDX39A-204ENST00000586558 ACTR10Q9NZ32 417 aa18.55■□□□□ 0.56
DDX39A-204ENST00000586558 AKAP7Q9P0M2 348 aaPredicted RBP18.55■□□□□ 0.56
DDX39A-204ENST00000586558 SEMA5BQ9P283 1151 aa18.55■□□□□ 0.56
DDX39A-204ENST00000586558 CIDEBQ9UHD4 219 aa18.55■□□□□ 0.56
DDX39A-204ENST00000586558 NEUROG3Q9Y4Z2 214 aa18.55■□□□□ 0.56
DDX39A-204ENST00000586558 COL27A1Q8IZC6 1860 aaPredicted RBP18.54■□□□□ 0.56
DDX39A-204ENST00000586558 CCDC187A0A096LP49 1063 aa18.54■□□□□ 0.56
DDX39A-204ENST00000586558 NPEPPSL1A6NEC2 478 aa18.54■□□□□ 0.56
DDX39A-204ENST00000586558 CDC7O00311 574 aa18.54■□□□□ 0.56
DDX39A-204ENST00000586558 FKBP9O95302 570 aa18.54■□□□□ 0.56
DDX39A-204ENST00000586558 CD1DP15813 335 aa18.54■□□□□ 0.56
DDX39A-204ENST00000586558 PNLIPRP1P54315 467 aa18.54■□□□□ 0.56
DDX39A-204ENST00000586558 SHC2P98077 582 aa18.54■□□□□ 0.56
DDX39A-204ENST00000586558 CSHL1Q14406 222 aa18.54■□□□□ 0.56
DDX39A-204ENST00000586558 TSNQ15631 228 aaKnown RBP18.54■□□□□ 0.56
DDX39A-204ENST00000586558 PHKG1Q16816 387 aa18.54■□□□□ 0.56
DDX39A-204ENST00000586558 PPP1R3AQ16821 1122 aa18.54■□□□□ 0.56
DDX39A-204ENST00000586558 RIBC1Q8N443 379 aaPredicted RBP18.54■□□□□ 0.56
DDX39A-204ENST00000586558 ATL1Q8WXF7 558 aa18.54■□□□□ 0.56
DDX39A-204ENST00000586558 SMPDL3AQ92484 453 aa18.54■□□□□ 0.56
DDX39A-204ENST00000586558 CABS1Q96KC9 395 aa18.54■□□□□ 0.56
DDX39A-204ENST00000586558 NRTNQ99748 197 aa18.54■□□□□ 0.56
DDX39A-204ENST00000586558 ARL15Q9NXU5 204 aa18.54■□□□□ 0.56
DDX39A-204ENST00000586558 UNC13CQ8NB66 2214 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 NCOR2Q9Y618 2525 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 FAM149AA5PLN7 773 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 KRT87PA6NCN2 255 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 RASSF9O75901 435 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 COL6A2P12110 1019 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 MPSTP25325 297 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 PRDX3P30048 256 aaKnown RBP18.53■□□□□ 0.56
DDX39A-204ENST00000586558 KPNA2P52292 529 aaKnown RBP18.53■□□□□ 0.56
DDX39A-204ENST00000586558 CDKL1Q00532 357 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 SLC5A12Q1EHB4 618 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 SNAP47Q5SQN1 464 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 CACHD1Q5VU97 1274 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 KLC3Q6P597 504 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 FBXO38Q6PIJ6 1188 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 SPESP1Q6UW49 350 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 FAM92BQ6ZTR7 304 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 FRA10AC1Q70Z53 315 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 KMT5CQ86Y97 462 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 SYTL1Q8IYJ3 562 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 CENPLQ8N0S6 344 aaPredicted RBP18.53■□□□□ 0.56
DDX39A-204ENST00000586558 AGBL5Q8NDL9 886 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 MYRIPQ8NFW9 859 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 ZNF480Q8WV37 535 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 HNRNPLLQ8WVV9 542 aaKnown RBP18.53■□□□□ 0.56
DDX39A-204ENST00000586558 KIAA1191Q96A73 305 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 CMKLR1Q99788 373 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 TMEM109Q9BVC6 243 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 SCNM1Q9BWG6 230 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 PITPNM3Q9BZ71 974 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 ROPN1BQ9BZX4 212 aaPredicted RBP18.53■□□□□ 0.56
DDX39A-204ENST00000586558 ROPN1Q9HAT0 212 aaPredicted RBP18.53■□□□□ 0.56
DDX39A-204ENST00000586558 C1GALT1Q9NS00 363 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 IGSF5Q9NSI5 407 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 KLHL3Q9UH77 587 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 KLK13Q9UKR3 277 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 IKZF3Q9UKT9 509 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 OARD1Q9Y530 152 aa18.53■□□□□ 0.56
DDX39A-204ENST00000586558 ISM1B1AKI9 464 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 KLHL2O95198 593 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 TOP3BO95985 862 aaKnown RBP18.52■□□□□ 0.56
DDX39A-204ENST00000586558 UGT2B7P16662 529 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 IMPA1P29218 277 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 CSTF2P33240 577 aaKnown RBP eCLIP18.52■□□□□ 0.56
DDX39A-204ENST00000586558 SLCO1A2P46721 670 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 PPP1CAP62136 330 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 CDKL4Q5MAI5 379 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 LCA5Q86VQ0 697 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 SPATA6LQ8N4H0 392 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 WDR36Q8NI36 951 aaKnown RBP18.52■□□□□ 0.56
DDX39A-204ENST00000586558 STAG3L4Q8TBR4 150 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 ACMSDQ8TDX5 336 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 EPS8L3Q8TE67 593 aaKnown RBP18.52■□□□□ 0.56
DDX39A-204ENST00000586558 KCTD4Q8WVF5 259 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 KLHL6Q8WZ60 621 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 FBXL8Q96CD0 374 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 OR2A14Q96R47 310 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 MAP3K3Q99759 626 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 VPS11Q9H270 941 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 ZNF768Q9H5H4 540 aaKnown RBP18.52■□□□□ 0.56
DDX39A-204ENST00000586558 SPHK1Q9NYA1 384 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 EURLQ9NYK6 297 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 STOX2Q9P2F5 926 aaPredicted RBP18.52■□□□□ 0.56
DDX39A-204ENST00000586558 TBK1Q9UHD2 729 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 PLAAQ9Y263 795 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 MSRB2Q9Y3D2 182 aa18.52■□□□□ 0.56
DDX39A-204ENST00000586558 CEP295Q9C0D2 2601 aa18.52■□□□□ 0.55
DDX39A-204ENST00000586558 E7ENX8 843 aa18.51■□□□□ 0.55
DDX39A-204ENST00000586558 KIF1CO43896 1103 aaKnown RBP18.51■□□□□ 0.55
DDX39A-204ENST00000586558 PRICKLE3O43900 615 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms