RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 HK3P52790 923 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 INHBCP55103 352 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 CLDN2P57739 230 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 SRP54P61011 504 aaKnown RBP6.02□□□□□ -1.45
LIG3-206ENST00000586058 ACTR1AP61163 376 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 TBPL1P62380 186 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 ZXDAP98168 799 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 IRF8Q02556 426 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 BTKQ06187 659 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 ZNF33BQ06732 778 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 FGL2Q14314 439 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 SQLEQ14534 574 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 ARHGAP19Q14CB8 494 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 NR6A1Q15406 480 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 PTCHD3Q3KNS1 767 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 GGTA1PQ4G0N0 100 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 PYCR3Q53H96 274 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 FBXO48Q5FWF7 155 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 XKR6Q5GH73 641 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 PRAMEF14Q5SWL7 426 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 C10orf62Q5T681 223 aaPredicted RBP6.02□□□□□ -1.45
LIG3-206ENST00000586058 C6orf163Q5TEZ5 329 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 PRAMEF13Q5VWM6 474 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 LIPJQ5W064 366 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 METRNLQ641Q3 311 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 CLEC6AQ6EIG7 209 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 EPGNQ6UW88 154 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 IL27RAQ6UWB1 636 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 CYHR1Q6ZMK1 362 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 GCNT7Q6ZNI0 430 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 Q6ZSR6 202 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 CLNKQ7Z7G1 428 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 ALYREFQ86V81 257 aaKnown RBP6.02□□□□□ -1.45
LIG3-206ENST00000586058 IQCHQ86VS3 1027 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 THOC6Q86W42 341 aaKnown RBP6.02□□□□□ -1.45
LIG3-206ENST00000586058 HID1Q8IV36 788 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 VRK3Q8IV63 474 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 ZNF547Q8IVP9 402 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 PARP9Q8IXQ6 854 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 KRT78Q8N1N4 520 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 PELI3Q8N2H9 469 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 CDYL2Q8N8U2 506 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 OR4F6Q8NGB9 312 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 ACTRT2Q8TDY3 377 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 MCUR1Q96AQ8 359 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 CLDN23Q96B33 292 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 BIRC7Q96CA5 298 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 PDXPQ96GD0 296 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 PPP3R2Q96LZ3 170 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 NSUN5Q96P11 429 aaKnown RBP6.02□□□□□ -1.45
LIG3-206ENST00000586058 EBF4Q9BQW3 602 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 CENPKQ9BS16 269 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 TMEM79Q9BSE2 394 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 EFCAB11Q9BUY7 163 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 NTMT1Q9BV86 223 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 LGR4Q9BXB1 951 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 C20orf27Q9GZN8 174 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 ATG10Q9H0Y0 220 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 MIR1-1HGQ9H1L0 117 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 MYLK2Q9H1R3 596 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 OR52A5Q9H2C5 316 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 PRDM6Q9NQX0 595 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 NMRK1Q9NWW6 199 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 TRNAU1APQ9NX07 287 aaKnown RBP6.02□□□□□ -1.45
LIG3-206ENST00000586058 STOX2Q9P2F5 926 aaPredicted RBP6.02□□□□□ -1.45
LIG3-206ENST00000586058 SUSD2Q9UGT4 822 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 APOBEC3BQ9UH17 382 aaKnown RBP6.02□□□□□ -1.45
LIG3-206ENST00000586058 IKZF3Q9UKT9 509 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.02□□□□□ -1.45
LIG3-206ENST00000586058 PRKAB1Q9Y478 270 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 RALGAPA1Q6GYQ0 2036 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 KMT2EQ8IZD2 1858 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 MDC1Q14676 2089 aaKnown RBP6.02□□□□□ -1.45
LIG3-206ENST00000586058 HEATR5BQ9P2D3 2071 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 ADAMTS9Q9P2N4 1935 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 CCDC163A0A0D9SF12 145 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 POM121BA6NF01 834 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 CFAP73A6NFT4 308 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 PRR5-ARHGAP8B1AHC4 643 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 TMEM233B4DJY2 109 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 H0Y8X5 98 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 MYO1CO00159 1063 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 PIP5K1BO14986 540 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 DCXO43602 365 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 MYO1DO94832 1006 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 STAMBPO95630 424 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 SLC16A8O95907 504 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 VIPP01282 170 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 IGHV4-34P06331 123 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 CAPN1P07384 714 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 DCNP07585 359 aaKnown RBP6.01□□□□□ -1.45
LIG3-206ENST00000586058 MTHFD1P11586 935 aaKnown RBP6.01□□□□□ -1.45
LIG3-206ENST00000586058 F3P13726 295 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 IDO1P14902 403 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 JUPP14923 745 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 ITPKAP23677 461 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 RPL10P27635 214 aaKnown RBP6.01□□□□□ -1.45
LIG3-206ENST00000586058 IMPA1P29218 277 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 PDHA2P29803 388 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 PRDX6P30041 224 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms