RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 GIMAP7Q8NHV1 300 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 DENND1AQ8TEH3 1009 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 TSPAN17Q96FV3 270 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 PDLIM5Q96HC4 596 aaKnown RBP13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 FMO2Q99518 471 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 KLK4Q9Y5K2 254 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 B3GALT1Q9Y5Z6 326 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 ADAMTS20P59510 1910 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 TCRBV9S1A1TA0A576 114 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 FAM159BA6NKW6 160 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 ISM1B1AKI9 464 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 TARM1B6A8C7 271 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 GFYI3L273 518 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 SLU7O95391 586 aaKnown RBP13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 HBQ1P09105 142 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 UGT2B7P16662 529 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 CCND1P24385 295 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 GABRB3P28472 473 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 AP1S2P56377 157 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 GPX6P59796 221 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 IL2P60568 153 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 POU4F1Q01851 419 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 ABHD18Q0P651 414 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 CLN3Q13286 438 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 GRB7Q14451 532 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 SLMAPQ14BN4 828 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 UBAP2Q5T6F2 1119 aaKnown RBP13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 HECTD2Q5U5R9 776 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 STRA8Q7Z7C7 330 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 ZC3HC1Q86WB0 502 aaKnown RBP13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 RASGRP3Q8IV61 690 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 IFT20Q8IY31 132 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 GSPT2Q8IYD1 628 aaKnown RBP13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 NLGN4XQ8N0W4 816 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 GPATCH11Q8N954 259 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 C19orf47Q8N9M1 422 aaKnown RBP13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 EIF1ADQ8N9N8 165 aaKnown RBP13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 NLGN4YQ8NFZ3 816 aaPredicted RBP13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 MCOLN3Q8TDD5 553 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 JPH3Q8WXH2 748 aaPredicted RBP13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 ASB11Q8WXH4 323 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 ZUFSPQ96AP4 578 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 LRFN5Q96NI6 719 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 DCBLD2Q96PD2 775 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 TRAPPC9Q96Q05 1148 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 OR6C1Q96RD1 312 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 TRIM54Q9BYV2 358 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 FGF21Q9NSA1 209 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 FOXJ2Q9P0K8 574 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 NFU1Q9UMS0 254 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 NFS1Q9Y697 457 aa13.35□□□□□ -0.27
PRKCSH-202ENST00000585540 FAM95CA0A1B0GW59 222 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 ARHGEF33A8MVX0 844 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 KIF1CO43896 1103 aaKnown RBP13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 RAD1O60671 282 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 STK17BO94768 372 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 DLGAP3O95886 979 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 HIST1H2AGP0C0S8 130 aaPredicted RBP13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 HIST1H2ADP20671 130 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 SPRP35270 261 aaPredicted RBP13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 BDKRB1P46663 353 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 SLC12A2P55011 1212 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 PPP1CAP62136 330 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 TLE3Q04726 772 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 ZC3H12BQ5HYM0 836 aaKnown RBP13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 GRTP1Q5TC63 336 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 CPNE9Q8IYJ1 553 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 SNRNP27Q8WVK2 155 aaKnown RBP13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 SMPDL3AQ92484 453 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 HIST1H2AHQ96KK5 128 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 OR2A14Q96R47 310 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 CCNL2Q96S94 520 aaPredicted RBP13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 RBBP8Q99708 897 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 HIST1H2AJQ99878 128 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 MCMBPQ9BTE3 642 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 H2AFJQ9BTM1 129 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 SLC12A9Q9BXP2 914 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 FUT8Q9BYC5 575 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 SPRY4Q9C004 299 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 PCBD2Q9H0N5 130 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 XKR8Q9H6D3 395 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 SMYD2Q9NRG4 433 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 ENAMQ9NRM1 1142 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 NOVA2Q9UNW9 492 aaKnown RBP13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 PCDHB3Q9Y5E6 796 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 AHCTF1Q8WYP5 2266 aa13.34□□□□□ -0.27
PRKCSH-202ENST00000585540 CCDC189A1A4V9 331 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 PMS2P1A4D2B8 440 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 SLC9B1P1A6NJY1 282 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 KLK10O43240 276 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 CPNE3O75131 537 aaKnown RBP13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 PIAS1O75925 651 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 C1QAP02745 245 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 MYBL2P10244 700 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 ST6GAL1P15907 406 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 ZNF37AP17032 561 aaPredicted RBP13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 HRH2P25021 359 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 CMPK1P30085 196 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 ABATP80404 500 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 RELAQ04206 551 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms