RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 MAD1L1Q9Y6D9 718 aa17.23■□□□□ 0.35
ERBB2-221ENST00000584888 MKRN2OSH3BPM6 223 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 TTI1O43156 1089 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 UGT2B7P16662 529 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 NR1D1P20393 614 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 ATP5DP30049 168 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 CBLBQ13191 982 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 CTBP1Q13363 440 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 THOC5Q13769 683 aaKnown RBP17.22■□□□□ 0.35
ERBB2-221ENST00000584888 IGFBP7Q16270 282 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 TMTC4Q5T4D3 741 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 ZNF470Q6ECI4 717 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 ZNF549Q6P9A3 640 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 TMEM126BQ8IUX1 230 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 DCUN1D3Q8IWE4 304 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 LINC01555Q8NAE3 123 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.22■□□□□ 0.35
ERBB2-221ENST00000584888 SYTL2Q9HCH5 934 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 C20orf96Q9NUD7 363 aaPredicted RBP17.22■□□□□ 0.35
ERBB2-221ENST00000584888 SOHLH2Q9NX45 425 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 KLHL42Q9P2K6 505 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 NFS1Q9Y697 457 aa17.22■□□□□ 0.35
ERBB2-221ENST00000584888 SMAPO00193 183 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 KDM1AO60341 852 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 CPNE3O75131 537 aaKnown RBP17.21■□□□□ 0.35
ERBB2-221ENST00000584888 BANF1O75531 89 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 RFPL1O75677 317 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 SCRG1O75711 98 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 MATN4O95460 622 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 C1orf105O95561 183 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 RPN2P04844 631 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 F7P08709 466 aaPredicted RBP17.21■□□□□ 0.35
ERBB2-221ENST00000584888 PVRP15151 417 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 PGAM1P18669 254 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 PTPN4P29074 926 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 SLC1A2P43004 574 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 GABRA4P48169 554 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 RAB28P51157 221 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 CLCN7P51798 805 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 PMS2P54278 862 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 RPS18P62269 152 aaKnown RBP17.21■□□□□ 0.35
ERBB2-221ENST00000584888 ETF1P62495 437 aaKnown RBP17.21■□□□□ 0.35
ERBB2-221ENST00000584888 FOXK1P85037 733 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 CRYMQ14894 314 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 KIR2DS3Q14952 304 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 ZIC1Q15915 447 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 COLEC12Q5KU26 742 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 TCTN3Q6NUS6 607 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 SLC38A9Q8NBW4 561 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 CFAP61Q8NHU2 1237 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 CALML6Q8TD86 181 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 TRIM51Q9BSJ1 452 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 NAT9Q9BTE0 207 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 FBXO6Q9NRD1 293 aaPredicted RBP17.21■□□□□ 0.35
ERBB2-221ENST00000584888 TLK1Q9UKI8 766 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 FBXO5Q9UKT4 447 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 MAN2B2Q9Y2E5 1009 aa17.21■□□□□ 0.35
ERBB2-221ENST00000584888 NBASA2RRP1 2371 aa17.21■□□□□ 0.34
ERBB2-221ENST00000584888 PRICKLE3O43900 615 aaPredicted RBP17.2■□□□□ 0.34
ERBB2-221ENST00000584888 SEC31AO94979 1220 aaKnown RBP17.2■□□□□ 0.34
ERBB2-221ENST00000584888 TTC4O95801 387 aa17.2■□□□□ 0.34
ERBB2-221ENST00000584888 RPS15P62841 145 aaKnown RBP17.2■□□□□ 0.34
ERBB2-221ENST00000584888 KLRB1Q12918 225 aa17.2■□□□□ 0.34
ERBB2-221ENST00000584888 GPS2Q13227 327 aa17.2■□□□□ 0.34
ERBB2-221ENST00000584888 UGT8Q16880 541 aa17.2■□□□□ 0.34
ERBB2-221ENST00000584888 SLC5A12Q1EHB4 618 aa17.2■□□□□ 0.34
ERBB2-221ENST00000584888 HSP90AA5PQ58FG0 334 aa17.2■□□□□ 0.34
ERBB2-221ENST00000584888 APLFQ8IW19 511 aaPredicted RBP17.2■□□□□ 0.34
ERBB2-221ENST00000584888 ZBTB2Q8N680 514 aa17.2■□□□□ 0.34
ERBB2-221ENST00000584888 OR2L8Q8NGY9 312 aa17.2■□□□□ 0.34
ERBB2-221ENST00000584888 SEC14L1Q92503 715 aa17.2■□□□□ 0.34
ERBB2-221ENST00000584888 MR1Q95460 341 aa17.2■□□□□ 0.34
ERBB2-221ENST00000584888 PWWP2AQ96N64 755 aa17.2■□□□□ 0.34
ERBB2-221ENST00000584888 SLC30A3Q99726 388 aa17.2■□□□□ 0.34
ERBB2-221ENST00000584888 WDR83Q9BRX9 315 aaKnown RBP17.2■□□□□ 0.34
ERBB2-221ENST00000584888 FAM60AQ9NP50 221 aa17.2■□□□□ 0.34
ERBB2-221ENST00000584888 FARSAQ9Y285 508 aaKnown RBP17.2■□□□□ 0.34
ERBB2-221ENST00000584888 HECTD1Q9ULT8 2610 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 FER1L5A0AVI2 2057 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 A0A0J9YY10 115 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 CYSRT1A8MQ03 144 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 H3BMH7 237 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 RASGRF2O14827 1237 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 HAUS5O94927 633 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 KLK3P07288 261 aaPredicted RBP17.19■□□□□ 0.34
ERBB2-221ENST00000584888 CHRM3P20309 590 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 CD9P21926 228 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 GABRB3P28472 473 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 ITGA8P53708 1063 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 TIAL1Q01085 375 aaKnown RBP eCLIP17.19■□□□□ 0.346e-9■■■■□ 21.2
ERBB2-221ENST00000584888 BBS9Q3SYG4 887 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 CCSMST1Q4G0I0 132 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 ACSBG2Q5FVE4 666 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 SPANXN3Q5MJ09 141 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 PRAMEF17Q5VTA0 474 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 STEAP4Q687X5 459 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 CNSTQ6PJW8 725 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 ZNF517Q6ZMY9 492 aaPredicted RBP17.19■□□□□ 0.34
ERBB2-221ENST00000584888 CDHR3Q6ZTQ4 885 aa17.19■□□□□ 0.34
ERBB2-221ENST00000584888 ASB18Q6ZVZ8 466 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms