RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 TIFAQ96CG3 184 aa10.03□□□□□ -0.8
RFFL-212ENST00000584655 NUS1Q96E22 293 aa10.03□□□□□ -0.8
RFFL-212ENST00000584655 TRAPPC9Q96Q05 1148 aa10.03□□□□□ -0.8
RFFL-212ENST00000584655 FERD3LQ96RJ6 166 aa10.03□□□□□ -0.8
RFFL-212ENST00000584655 SMAD5Q99717 465 aaKnown RBP10.03□□□□□ -0.8
RFFL-212ENST00000584655 KCTD14Q9BQ13 255 aaPredicted RBP10.03□□□□□ -0.8
RFFL-212ENST00000584655 TUBB6Q9BUF5 446 aa10.03□□□□□ -0.8
RFFL-212ENST00000584655 DERL2Q9GZP9 239 aa10.03□□□□□ -0.8
RFFL-212ENST00000584655 TFB2MQ9H5Q4 396 aaKnown RBP10.03□□□□□ -0.8
RFFL-212ENST00000584655 ATXN10Q9UBB4 475 aa10.03□□□□□ -0.8
RFFL-212ENST00000584655 STON1Q9Y6Q2 735 aa10.03□□□□□ -0.8
RFFL-212ENST00000584655 ARHGEF33A8MVX0 844 aa10.02□□□□□ -0.8
RFFL-212ENST00000584655 ERAL1O75616 437 aaKnown RBP10.02□□□□□ -0.8
RFFL-212ENST00000584655 AOC1P19801 751 aa10.02□□□□□ -0.8
RFFL-212ENST00000584655 IL12AP29459 219 aa10.02□□□□□ -0.8
RFFL-212ENST00000584655 ATP6V0D1P61421 351 aa10.02□□□□□ -0.8
RFFL-212ENST00000584655 HTRA4P83105 476 aaPredicted RBP10.02□□□□□ -0.8
RFFL-212ENST00000584655 PWP1Q13610 501 aa10.02□□□□□ -0.8
RFFL-212ENST00000584655 SNAP47Q5SQN1 464 aa10.02□□□□□ -0.8
RFFL-212ENST00000584655 CYP20A1Q6UW02 462 aa10.02□□□□□ -0.8
RFFL-212ENST00000584655 Q6ZSR9 355 aa10.02□□□□□ -0.8
RFFL-212ENST00000584655 ASZ1Q8WWH4 475 aa10.02□□□□□ -0.8
RFFL-212ENST00000584655 MAL2Q969L2 176 aa10.02□□□□□ -0.8
RFFL-212ENST00000584655 EPS15L1Q9UBC2 864 aa10.02□□□□□ -0.8
RFFL-212ENST00000584655 SH2B3Q9UQQ2 575 aa10.02□□□□□ -0.8
RFFL-212ENST00000584655 DTNAQ9Y4J8 743 aa10.02□□□□□ -0.8
RFFL-212ENST00000584655 OR7A17O14581 309 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 ACADMP11310 421 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 ADRB3P13945 408 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 TYRP1P17643 537 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 EEF1B2P24534 225 aaKnown RBP10.02□□□□□ -0.81
RFFL-212ENST00000584655 POLR2JP52435 117 aaKnown RBP10.02□□□□□ -0.81
RFFL-212ENST00000584655 ADARP55265 1226 aaKnown RBP10.02□□□□□ -0.81
RFFL-212ENST00000584655 ID2Q02363 134 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 DBPQ10586 325 aaPredicted RBP10.02□□□□□ -0.81
RFFL-212ENST00000584655 WDR53Q7Z5U6 358 aaPredicted RBP10.02□□□□□ -0.81
RFFL-212ENST00000584655 MAGEE2Q8TD90 523 aaPredicted RBP10.02□□□□□ -0.81
RFFL-212ENST00000584655 OSCP1Q8WVF1 389 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 GLYATL1Q969I3 302 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 DNAJA3Q96EY1 480 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 C12orf66Q96MD2 445 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 ZBTB18Q99592 522 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 INPP5KQ9BT40 448 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 RBCK1Q9BYM8 510 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 VTI1BQ9UEU0 232 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 ANGPTL2Q9UKU9 493 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 ATXN2Q99700 1313 aaKnown RBP10.02□□□□□ -0.81
RFFL-212ENST00000584655 MAGEB17A8MXT2 336 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 SDC3O75056 442 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 CYP2A6P11509 494 aaPredicted RBP10.02□□□□□ -0.81
RFFL-212ENST00000584655 OXTRP30559 389 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 MAGEA12P43365 314 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 RANBP1P43487 201 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 RAB8AP61006 207 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 ACSM2AQ08AH3 577 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 LAMB3Q13751 1172 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 SPIDRQ14159 915 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 KRT72Q14CN4 511 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 UBXN2BQ14CS0 331 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 MAPKAPK3Q16644 382 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 ACSM2BQ68CK6 577 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 ENPP7Q6UWV6 458 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 RNF111Q6ZNA4 994 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 TRIM73Q86UV7 250 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 DHFR2Q86XF0 187 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 C1orf52Q8N6N3 182 aaKnown RBP10.02□□□□□ -0.81
RFFL-212ENST00000584655 OR52J3Q8NH60 311 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 CARS2Q9HA77 564 aaKnown RBP10.02□□□□□ -0.81
RFFL-212ENST00000584655 KCTD5Q9NXV2 234 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 VPS9D1Q9Y2B5 631 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 ZNF451Q9Y4E5 1061 aa10.02□□□□□ -0.81
RFFL-212ENST00000584655 RTTNQ86VV8 2226 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 CHD5Q8TDI0 1954 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 A0A1W2PQU0 124 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 SLC9A3R1O14745 358 aaPredicted RBP10.01□□□□□ -0.81
RFFL-212ENST00000584655 TPST2O60704 377 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 MYF5P13349 255 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 COX7A2P14406 83 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 HOXB3P14651 431 aaPredicted RBP10.01□□□□□ -0.81
RFFL-212ENST00000584655 HOXB2P14652 356 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 VIPR1P32241 457 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 LIPEQ05469 1076 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 AGTRAPQ6RW13 159 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 FAM83HQ6ZRV2 1179 aaPredicted RBP10.01□□□□□ -0.81
RFFL-212ENST00000584655 GALNT5Q7Z7M9 940 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 PCYOX1LQ8NBM8 494 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 KCT2Q8NC54 265 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 PPP2R3CQ969Q6 453 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 LRTM1Q9HBL6 345 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 S100A14Q9HCY8 104 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 EQTNQ9NQ60 294 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 SVILO95425 2214 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 POM121BA6NF01 834 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 GMFGO60234 142 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 FZD6O60353 706 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 NOBOXO60393 691 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 CDH15P55291 814 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 OR4D2P58180 307 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 TRMT5Q32P41 509 aaKnown RBP10.01□□□□□ -0.81
RFFL-212ENST00000584655 WLSQ5T9L3 541 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms