RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 NUDT21O43809 227 aaKnown RBP9.24□□□□□ -0.93
RFFL-210ENST00000582308 SH3BP5O60239 455 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 FOXD2O60548 495 aaPredicted RBP9.24□□□□□ -0.93
RFFL-210ENST00000582308 SMIM24O75264 130 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 S100BP04271 92 aaPredicted RBP9.24□□□□□ -0.93
RFFL-210ENST00000582308 BPGMP07738 259 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 ANXA5P08758 320 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 GFAPP14136 432 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 GLB1P16278 677 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 TAC1P20366 129 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 KCNA4P22459 653 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 ALDH3A1P30838 453 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 GGT5P36269 586 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 RAB28P51157 221 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 PNLIPRP1P54315 467 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 PRKAA2P54646 552 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 ALDH18A1P54886 795 aaKnown RBP9.24□□□□□ -0.93
RFFL-210ENST00000582308 NFKB2Q00653 900 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 NAE1Q13564 534 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 ARHGAP19Q14CB8 494 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 SETDB1Q15047 1291 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 STPG1Q5TH74 334 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 HHATQ5VTY9 493 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 SULT1C3Q6IMI6 304 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 GUSBP11Q6P575 273 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 AGTRAPQ6RW13 159 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 ZNF438Q7Z4V0 828 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 AMIGO1Q86WK6 493 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 C10orf107Q8IVU9 208 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 RBM12BQ8IXT5 1001 aaKnown RBP9.24□□□□□ -0.93
RFFL-210ENST00000582308 LRRC56Q8IYG6 542 aaPredicted RBP9.24□□□□□ -0.93
RFFL-210ENST00000582308 ADGRF3Q8IZF5 1079 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 FBXO39Q8N4B4 442 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 C2orf73Q8N5S3 287 aaPredicted RBP9.24□□□□□ -0.93
RFFL-210ENST00000582308 PTGR2Q8N8N7 351 aaPredicted RBP9.24□□□□□ -0.93
RFFL-210ENST00000582308 LINC01555Q8NAE3 123 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 PPFIBP2Q8ND30 876 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 MGARPQ8TDB4 240 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 SETD7Q8WTS6 366 aaKnown RBP9.24□□□□□ -0.93
RFFL-210ENST00000582308 ESAMQ96AP7 390 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 SH3KBP1Q96B97 665 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 PHF21BQ96EK2 531 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 TMEM79Q9BSE2 394 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 TWSG1Q9GZX9 223 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 ATG10Q9H0Y0 220 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 ACSS2Q9NR19 701 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 OXSMQ9NWU1 459 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 NKIRAS1Q9NYS0 192 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 SPATA7Q9P0W8 599 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 LNPEPQ9UIQ6 1025 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 TMCO1Q9UM00 188 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 ASB1Q9Y576 335 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 CEP250Q9BV73 2442 aa9.24□□□□□ -0.93
RFFL-210ENST00000582308 A0A1W2PPV9 198 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 CPED1A4D0V7 1026 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 WDR91A4D1P6 747 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 EME2A4GXA9 379 aaPredicted RBP9.23□□□□□ -0.93
RFFL-210ENST00000582308 OR6C74A6NCV1 312 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 PABPN1LA6NDY0 278 aaKnown RBP9.23□□□□□ -0.93
RFFL-210ENST00000582308 LILRA5A6NI73 299 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 E7ENX8 843 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 STX16-NPEPL1H3BU86 382 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 BTN3A3O00478 584 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 STX16O14662 325 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 B4GAT1O43505 415 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 PRICKLE3O43900 615 aaPredicted RBP9.23□□□□□ -0.93
RFFL-210ENST00000582308 CBFA2T3O75081 653 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 IPO13O94829 963 aaKnown RBP9.23□□□□□ -0.93
RFFL-210ENST00000582308 SIX3O95343 332 aaPredicted RBP9.23□□□□□ -0.93
RFFL-210ENST00000582308 CKMT1AP12532 417 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 CHN1P15882 459 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 TYRP1P17643 537 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 SHMT2P34897 504 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 HSD17B2P37059 387 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 GDF5P43026 501 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 GPR3P46089 330 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 SLC6A12P48065 614 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 HSPA7P48741 367 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 HNMTP50135 292 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 ATP1A2P50993 1020 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 OR1D5P58170 312 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 DNAJB13P59910 316 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 TAP2Q03519 686 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 BIRC2Q13490 618 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 NR1D2Q14995 579 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 PLCL1Q15111 1095 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 PTCHD3Q3KNS1 767 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 INAVAQ3KP66 663 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 PERM1Q5SV97 790 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 ANKS6Q68DC2 871 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 SUSD1Q6UWL2 747 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 SLC22A9Q8IVM8 553 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 NAXDQ8IW45 347 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 KLHDC8AQ8IYD2 350 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 SYTL1Q8IYJ3 562 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 TCAIMQ8N3R3 496 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 OR2L8Q8NGY9 312 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 OR56A3Q8NH54 315 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 HMGCLL1Q8TB92 370 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 RHBDD1Q8TEB9 315 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms