RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 RSL1D1O76021 490 aaKnown RBP22.06■■□□□ 1.12
CCDC47-204ENST00000582252 EPHX1P07099 455 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 EPORP19235 508 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 VARSP26640 1264 aaKnown RBP22.06■■□□□ 1.12
CCDC47-204ENST00000582252 PEX2P28328 305 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 MAPK1P28482 360 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 IL12RB1P42701 662 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 ATXN3P54252 364 aaPredicted RBP22.06■■□□□ 1.12
CCDC47-204ENST00000582252 PLOD1Q02809 727 aaPredicted RBP22.06■■□□□ 1.12
CCDC47-204ENST00000582252 ABRQ12979 859 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 CPSF6Q16630 551 aaKnown RBP eCLIP22.06■■□□□ 1.12
CCDC47-204ENST00000582252 GRAMD1BQ3KR37 738 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 SGO1Q5FBB7 561 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 C6orf10Q5SRN2 563 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 LIPJQ5W064 366 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 LPCAT4Q643R3 524 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 NAIF1Q69YI7 327 aaPredicted RBP22.06■■□□□ 1.12
CCDC47-204ENST00000582252 KLHDC8AQ8IYD2 350 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 RGL4Q8IZJ4 473 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 SLC44A3Q8N4M1 653 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 GOLM1Q8NBJ4 401 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 DPY30Q9C005 99 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 AP4S1Q9Y587 144 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 PCDHA9Q9Y5H5 950 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 ZFC3H1O60293 1989 aaKnown RBP22.05■■□□□ 1.12
CCDC47-204ENST00000582252 ATG2BQ96BY7 2078 aa22.05■■□□□ 1.12
CCDC47-204ENST00000582252 ASPDHA6ND91 283 aa22.05■■□□□ 1.12
CCDC47-204ENST00000582252 DNAJA2O60884 412 aa22.05■■□□□ 1.12
CCDC47-204ENST00000582252 IL12AP29459 219 aa22.05■■□□□ 1.12
CCDC47-204ENST00000582252 METAP1P53582 386 aa22.05■■□□□ 1.12
CCDC47-204ENST00000582252 EEFSECP57772 596 aaKnown RBP22.05■■□□□ 1.12
CCDC47-204ENST00000582252 CAPRIN1Q14444 709 aaKnown RBP22.05■■□□□ 1.12
CCDC47-204ENST00000582252 MMAAQ8IVH4 418 aaKnown RBP22.05■■□□□ 1.12
CCDC47-204ENST00000582252 ADCY4Q8NFM4 1077 aa22.05■■□□□ 1.12
CCDC47-204ENST00000582252 FAM8A1Q9UBU6 413 aa22.05■■□□□ 1.12
CCDC47-204ENST00000582252 CNOT6Q9ULM6 557 aaKnown RBP22.05■■□□□ 1.12
CCDC47-204ENST00000582252 SLC22A14Q9Y267 594 aa22.05■■□□□ 1.12
CCDC47-204ENST00000582252 DTNAQ9Y4J8 743 aa22.05■■□□□ 1.12
CCDC47-204ENST00000582252 AQP12BA6NM10 295 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 ARHGEF33A8MVX0 844 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 ANKRD28O15084 1053 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 MMP20O60882 483 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 PRPH2P23942 346 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 SLC7A1P30825 629 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 HALP42357 657 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 CASP2P42575 452 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 SOX9P48436 509 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 MRPS35P82673 323 aaKnown RBP22.04■■□□□ 1.12
CCDC47-204ENST00000582252 HMGCS1Q01581 520 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 PAGE3Q5JUK9 113 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 AQP12AQ8IXF9 295 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 ICA1LQ8NDH6 482 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 OR2T34Q8NGX1 318 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 OR2T3Q8NH03 318 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 TMEM125Q96AQ2 219 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 VCXQ9H320 206 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 COPS7BQ9H9Q2 264 aaPredicted RBP22.04■■□□□ 1.12
CCDC47-204ENST00000582252 TRIM39Q9HCM9 518 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 PRSS16Q9NQE7 514 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 FARSBQ9NSD9 589 aaKnown RBP22.04■■□□□ 1.12
CCDC47-204ENST00000582252 CMTM6Q9NX76 183 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 ZNHIT2Q9UHR6 403 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 RIMS3Q9UJD0 308 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 TMED5Q9Y3A6 229 aa22.04■■□□□ 1.12
CCDC47-204ENST00000582252 KCNE1BA0A087WTH5 132 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 TMEM202A6NGA9 273 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 H3BM21 787 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 VEGFDO43915 354 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 SOD1P00441 154 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 PDYNP01213 254 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 PRPS2P11908 318 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 JUPP14923 745 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 PFN3P60673 137 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 INPP5AQ14642 412 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 LRRC36Q1X8D7 754 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 NEK5Q6P3R8 708 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 FBXO15Q8NCQ5 510 aaPredicted RBP22.03■■□□□ 1.12
CCDC47-204ENST00000582252 NR1H4Q96RI1 486 aaPredicted RBP22.03■■□□□ 1.12
CCDC47-204ENST00000582252 C8orf33Q9H7E9 229 aaPredicted RBP22.03■■□□□ 1.12
CCDC47-204ENST00000582252 ACTR3BQ9P1U1 418 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 NPIPB8E9PQR5 432 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 NPC1O15118 1278 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 ITPKAP23677 461 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 PBLDP30039 288 aaPredicted RBP22.03■■□□□ 1.12
CCDC47-204ENST00000582252 CTHP32929 405 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 PREPP48147 710 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 AASDHQ4L235 1098 aaPredicted RBP22.03■■□□□ 1.12
CCDC47-204ENST00000582252 THOC6Q86W42 341 aaKnown RBP22.03■■□□□ 1.12
CCDC47-204ENST00000582252 RALGPS2Q86X27 583 aaPredicted RBP22.03■■□□□ 1.12
CCDC47-204ENST00000582252 TRAPPC5Q8IUR0 188 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 HID1Q8IV36 788 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 LIX1Q8N485 282 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 DNAJB14Q8TBM8 379 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 PYCR2Q96C36 320 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 CMTM7Q96FZ5 175 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 LINC00615Q96LM1 132 aaPredicted RBP22.03■■□□□ 1.12
CCDC47-204ENST00000582252 BTBD9Q96Q07 612 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 ATG10Q9H0Y0 220 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 ALG2Q9H553 416 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 ACTL8Q9H568 366 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms