RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	GABRA4	P48169	554 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	CSE1L	P55060	971 aa	Known RBP	12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	GPS2	Q13227	327 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	PTK6	Q13882	451 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	GRB7	Q14451	532 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	ARHGAP19	Q14CB8	494 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	UGT8	Q16880	541 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	DEFB109B	Q30KR1	87 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	CTSL3P	Q5NE16	218 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	RNASEH2B	Q5TBB1	312 aa	Known RBP	12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	RHBDD2	Q6NTF9	364 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	C16orf46	Q6P387	395 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	CES3	Q6UWW8	571 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	DNAJC22	Q8N4W6	341 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	LMNTD1	Q8N9Z9	388 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	LINC01555	Q8NAE3	123 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	SLC38A9	Q8NBW4	561 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	KCNJ9	Q92806	393 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	ZUFSP	Q96AP4	578 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	ZNF669	Q96BR6	464 aa	Predicted RBP	12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	CLIP3	Q96DZ5	547 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	SIGLEC10	Q96LC7	697 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	SLC7A5P2	Q9GIP4	190 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	CCDC68	Q9H2F9	335 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	PCMTD2	Q9NV79	361 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	TRMT1	Q9NXH9	659 aa	Known RBP	12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	FAM169A	Q9Y6X4	670 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	TENM4	Q6N022	2769 aa		12.14	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	ZNF839	A8K0R7	811 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708		C9J4A7	227 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	GOLGA8K	D6RF30	607 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708		E5RI56	91 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	MKRN2OS	H3BPM6	223 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	GOLGA8T	H3BQL2	631 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	CCDC188	H7C350	402 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708		J3QKU1	62 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	DNALI1	O14645	258 aa	Predicted RBP	12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	NDC80	O14777	642 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	ZNF749	O43361	778 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	PVR	P15151	417 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	PGAM1	P18669	254 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	FMO4	P31512	558 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	PMS2	P54278	862 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	NFATC3	Q12968	1075 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	ERV3-1	Q14264	604 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	ZC3H12B	Q5HYM0	836 aa	Known RBP	12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	YOD1	Q5VVQ6	348 aa	Predicted RBP	12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	ZNF470	Q6ECI4	717 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	LRRC8E	Q6NSJ5	796 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	SYTL1	Q8IYJ3	562 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	ZBTB2	Q8N680	514 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	FBXO15	Q8NCQ5	510 aa	Predicted RBP	12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	CFAP61	Q8NHU2	1237 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	C9orf43	Q8TAL5	461 aa	Predicted RBP	12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	SKA2	Q8WVK7	121 aa	Predicted RBP	12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	DLG3	Q92796	817 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	IP6K3	Q96PC2	410 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	CHST8	Q9H2A9	424 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	ASIC3	Q9UHC3	531 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	PADI2	Q9Y2J8	665 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	CRYL1	Q9Y2S2	319 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	MRPS18B	Q9Y676	258 aa	Known RBP	12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	SAR1B	Q9Y6B6	198 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	MAD1L1	Q9Y6D9	718 aa		12.13	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	CDC14C	A4D256	554 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	CTAGE9	A4FU28	777 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	GOLGA8M	H3BSY2	632 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	ZNF185	O15231	689 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	ZSCAN9	O15535	394 aa	Predicted RBP	12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	SUV39H1	O43463	412 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	PRICKLE3	O43900	615 aa	Predicted RBP	12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	SRPX2	O60687	465 aa	Predicted RBP	12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	NIPSNAP2	O75323	286 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	PSIP1	O75475	530 aa	Known RBP	12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	RFPL1	O75677	317 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	CAT	P04040	527 aa	Known RBP	12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	CBSL	P0DN79	551 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	PEBP1	P30086	187 aa	Known RBP	12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	CBS	P35520	551 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	ARSF	P54793	590 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	GNG11	P61952	73 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	MORF4L2	Q15014	288 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	SF1	Q15637	639 aa	Known RBP	12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	ZIC1	Q15915	447 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	CYP2A13	Q16696	494 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	TCTE1	Q5JU00	501 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	ZNF385C	Q66K41	422 aa	Predicted RBP	12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	TCTN3	Q6NUS6	607 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	FAM199X	Q6PEV8	388 aa	Predicted RBP	12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	ATG14	Q6ZNE5	492 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	KIAA0408	Q6ZU52	694 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	GALNT7	Q86SF2	657 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	TRIM73	Q86UV7	250 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	CREG2	Q8IUH2	290 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	NACC2	Q96BF6	587 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	LRRC39	Q96DD0	335 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	NAPG	Q99747	312 aa	Predicted RBP	12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	NRTN	Q99748	197 aa		12.12	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	12.12	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms