RNA–Protein interactions for RNA: ENST00000581523.5

MSI2-213, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-213	ENST00000581523	ARMCX3	Q9UH62	379 aa	Predicted RBP	4.37	□□□□□ -1.71
MSI2-213	ENST00000581523	MAN1B1	Q9UKM7	699 aa		4.37	□□□□□ -1.71
MSI2-213	ENST00000581523	VPS4A	Q9UN37	437 aa		4.37	□□□□□ -1.71
MSI2-213	ENST00000581523	NAALADL1	Q9UQQ1	740 aa		4.37	□□□□□ -1.71
MSI2-213	ENST00000581523	ZNF510	Q9Y2H8	683 aa		4.37	□□□□□ -1.71
MSI2-213	ENST00000581523	TSC22D4	Q9Y3Q8	395 aa		4.37	□□□□□ -1.71
MSI2-213	ENST00000581523	ACACB	O00763	2458 aa		4.37	□□□□□ -1.71
MSI2-213	ENST00000581523	CHD8	Q9HCK8	2581 aa		4.37	□□□□□ -1.71
MSI2-213	ENST00000581523	NBEA	Q8NFP9	2946 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	EPG5	Q9HCE0	2579 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	CCDC151	A5D8V7	595 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	GAGE10	A6NGK3	116 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	TTC34	A8MYJ7	566 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523		E5RJQ4	531 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523		H0Y626	953 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	CAPN9	O14815	690 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	TSPAN4	O14817	238 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	PSMA7	O14818	248 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	ACSL4	O60488	711 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	SDC3	O75056	442 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	GRAP2	O75791	330 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	LUC7L3	O95232	432 aa	Known RBP	4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	SMC2	O95347	1197 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	IGLV3-27	P01718	113 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	APOE	P02649	317 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	IGHV4-34	P06331	123 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	C1S	P09871	688 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	NPS	P0C0P6	89 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	PNMA6A	P0CW24	399 aa	Predicted RBP	4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	VDR	P11473	427 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	PDGFRA	P16234	1089 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	TBXAS1	P24557	533 aa	Predicted RBP	4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	OXTR	P30559	389 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	MAT2A	P31153	395 aa	Known RBP	4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	RDX	P35241	583 aa	Known RBP	4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	USP8	P40818	1118 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	AGTR2	P50052	363 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	MVD	P53602	400 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	ADPRH	P54922	357 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	C21orf59	P57076	290 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	ST8SIA6	P61647	398 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	FKBP3	Q00688	224 aa	Known RBP	4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	LRRC63	Q05C16	580 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	PTP4A2	Q12974	167 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	DNAJC3	Q13217	504 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	STIM1	Q13586	685 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	BECN1	Q14457	450 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	ERCC6L	Q2NKX8	1250 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	RNASE12	Q5GAN4	147 aa	Known RBP	4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	FAM69A	Q5T7M9	428 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	NUGGC	Q68CJ6	796 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	GJB7	Q6PEY0	223 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	NCEH1	Q6PIU2	408 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	KIRREL2	Q6UWL6	708 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	FAM217A	Q8IXS0	508 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	PALM2	Q8IXS6	379 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	APCDD1	Q8J025	514 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	STK40	Q8N2I9	435 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	TTC39C	Q8N584	583 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	ENGASE	Q8NFI3	743 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	CADM4	Q8NFZ8	388 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	PROKR1	Q8TCW9	393 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	TMEM174	Q8WUU8	243 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	NELFB	Q8WX92	580 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	ADAMTS14	Q8WXS8	1223 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	DNASE2B	Q8WZ79	361 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	RNFT2	Q96EX2	444 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	TMA16	Q96EY4	203 aa	Known RBP	4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	CCDC34	Q96HJ3	373 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	RSRC1	Q96IZ7	334 aa	Known RBP	4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	C20orf173	Q96LM9	149 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	CD180	Q99467	661 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	CRACR2A	Q9BSW2	395 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	KRTAP3-1	Q9BYR8	98 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	INTS2	Q9H0H0	1204 aa	Known RBP	4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	PDCL3	Q9H2J4	239 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	FZD3	Q9NPG1	666 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	ABCC13	Q9NSE7	274 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	BEX4	Q9NWD9	120 aa	Predicted RBP	4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	FBXL12	Q9NXK8	326 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	POLG2	Q9UHN1	485 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	INTS6	Q9UL03	887 aa	Known RBP	4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	PLA2G4C	Q9UP65	541 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	CA5B	Q9Y2D0	317 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	HBS1L	Q9Y450	684 aa	Known RBP	4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	ATP6V1D	Q9Y5K8	247 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	CELSR3	Q9NYQ7	3312 aa		4.36	□□□□□ -1.71
MSI2-213	ENST00000581523	COL5A1	P20908	1838 aa	Predicted RBP	4.35	□□□□□ -1.71
MSI2-213	ENST00000581523	NPIPB13	A6NJU9	1138 aa		4.35	□□□□□ -1.71
MSI2-213	ENST00000581523	NPIPB5	A8MRT5	1133 aa		4.35	□□□□□ -1.71
MSI2-213	ENST00000581523	NPIPB4	C9JG80	1138 aa		4.35	□□□□□ -1.71
MSI2-213	ENST00000581523		F5H5T6	163 aa		4.35	□□□□□ -1.71
MSI2-213	ENST00000581523		H0YIZ8	118 aa		4.35	□□□□□ -1.71
MSI2-213	ENST00000581523	QSOX1	O00391	747 aa		4.35	□□□□□ -1.71
MSI2-213	ENST00000581523	PAPSS1	O43252	624 aa	Predicted RBP	4.35	□□□□□ -1.71
MSI2-213	ENST00000581523	RTN2	O75298	545 aa		4.35	□□□□□ -1.71
MSI2-213	ENST00000581523	LETM1	O95202	739 aa	Predicted RBP	4.35	□□□□□ -1.71
MSI2-213	ENST00000581523	TRIM16	O95361	564 aa		4.35	□□□□□ -1.71
MSI2-213	ENST00000581523	IL1B	P01584	269 aa		4.35	□□□□□ -1.71
MSI2-213	ENST00000581523	IGLV3-19	P01714	112 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms