RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 QKIQ96PU8 341 aaKnown RBP eCLIP18.33■□□□□ 0.52
NDEL1-209ENST00000580738 ZNF160Q9HCG1 818 aa18.33■□□□□ 0.52
NDEL1-209ENST00000580738 SEMA3GQ9NS98 782 aa18.33■□□□□ 0.52
NDEL1-209ENST00000580738 DDX56Q9NY93 547 aaKnown RBP18.33■□□□□ 0.52
NDEL1-209ENST00000580738 SH3BGRL2Q9UJC5 107 aa18.33■□□□□ 0.52
NDEL1-209ENST00000580738 TRHDEQ9UKU6 1024 aa18.33■□□□□ 0.52
NDEL1-209ENST00000580738 MED13LQ71F56 2210 aa18.33■□□□□ 0.52
NDEL1-209ENST00000580738 TRBV5-4A0A0C4DH59 114 aa18.32■□□□□ 0.52
NDEL1-209ENST00000580738 DSCR3O14972 297 aa18.32■□□□□ 0.52
NDEL1-209ENST00000580738 CRTAMO95727 393 aa18.32■□□□□ 0.52
NDEL1-209ENST00000580738 PIM1P11309 404 aaPredicted RBP18.32■□□□□ 0.52
NDEL1-209ENST00000580738 ACRV1P26436 265 aa18.32■□□□□ 0.52
NDEL1-209ENST00000580738 MC4RP32245 332 aa18.32■□□□□ 0.52
NDEL1-209ENST00000580738 OR1D4P47884 311 aa18.32■□□□□ 0.52
NDEL1-209ENST00000580738 TNFSF10P50591 281 aa18.32■□□□□ 0.52
NDEL1-209ENST00000580738 KRTAP10-9P60411 292 aa18.32■□□□□ 0.52
NDEL1-209ENST00000580738 GPR33Q49SQ1 333 aa18.32■□□□□ 0.52
NDEL1-209ENST00000580738 NAPRTQ6XQN6 538 aa18.32■□□□□ 0.52
NDEL1-209ENST00000580738 TBC1D21Q8IYX1 336 aa18.32■□□□□ 0.52
NDEL1-209ENST00000580738 LMNTD1Q8N9Z9 388 aa18.32■□□□□ 0.52
NDEL1-209ENST00000580738 GBA3Q9H227 469 aa18.32■□□□□ 0.52
NDEL1-209ENST00000580738 CUTCQ9NTM9 273 aa18.32■□□□□ 0.52
NDEL1-209ENST00000580738 POLG2Q9UHN1 485 aa18.32■□□□□ 0.52
NDEL1-209ENST00000580738 VSTM2BA6NLU5 285 aa18.31■□□□□ 0.52
NDEL1-209ENST00000580738 ANXA9O76027 345 aa18.31■□□□□ 0.52
NDEL1-209ENST00000580738 MST1P26927 711 aa18.31■□□□□ 0.52
NDEL1-209ENST00000580738 GRIA3P42263 894 aa18.31■□□□□ 0.52
NDEL1-209ENST00000580738 CA7P43166 264 aa18.31■□□□□ 0.52
NDEL1-209ENST00000580738 FANCCQ00597 558 aa18.31■□□□□ 0.52
NDEL1-209ENST00000580738 KIR2DS3Q14952 304 aa18.31■□□□□ 0.52
NDEL1-209ENST00000580738 IQCB1Q15051 598 aa18.31■□□□□ 0.52
NDEL1-209ENST00000580738 ASTE1Q2TB18 679 aaPredicted RBP18.31■□□□□ 0.52
NDEL1-209ENST00000580738 TAS2R42Q7RTR8 314 aa18.31■□□□□ 0.52
NDEL1-209ENST00000580738 OR5K2Q8NHB8 316 aa18.31■□□□□ 0.52
NDEL1-209ENST00000580738 PSMF1Q92530 271 aa18.31■□□□□ 0.52
NDEL1-209ENST00000580738 C8orf44Q96CB5 159 aa18.31■□□□□ 0.52
NDEL1-209ENST00000580738 PTGFRNQ9P2B2 879 aa18.31■□□□□ 0.52
NDEL1-209ENST00000580738 NXT1Q9UKK6 140 aaKnown RBP18.31■□□□□ 0.52
NDEL1-209ENST00000580738 PRSS21Q9Y6M0 314 aa18.31■□□□□ 0.52
NDEL1-209ENST00000580738 MAU2Q9Y6X3 613 aa18.31■□□□□ 0.52
NDEL1-209ENST00000580738 SNRNP200O75643 2136 aaKnown RBP18.31■□□□□ 0.52
NDEL1-209ENST00000580738 TRAV17A0A0B4J275 112 aa18.3■□□□□ 0.52
NDEL1-209ENST00000580738 DYTNA2CJ06 578 aa18.3■□□□□ 0.52
NDEL1-209ENST00000580738 BHMG1C9JSJ3 638 aaPredicted RBP18.3■□□□□ 0.52
NDEL1-209ENST00000580738 C19orf84I3L1E1 186 aa18.3■□□□□ 0.52
NDEL1-209ENST00000580738 LIN7AO14910 233 aaPredicted RBP18.3■□□□□ 0.52
NDEL1-209ENST00000580738 WISP2O76076 250 aa18.3■□□□□ 0.52
NDEL1-209ENST00000580738 HPP00738 406 aa18.3■□□□□ 0.52
NDEL1-209ENST00000580738 F10P00742 488 aa18.3■□□□□ 0.52
NDEL1-209ENST00000580738 KRTAP21-3Q3LHN1 58 aa18.3■□□□□ 0.52
NDEL1-209ENST00000580738 DENND5AQ6IQ26 1287 aa18.3■□□□□ 0.52
NDEL1-209ENST00000580738 RPTNQ6XPR3 784 aa18.3■□□□□ 0.52
NDEL1-209ENST00000580738 PIANPQ8IYJ0 282 aa18.3■□□□□ 0.52
NDEL1-209ENST00000580738 PRSS58Q8IYP2 241 aa18.3■□□□□ 0.52
NDEL1-209ENST00000580738 C2orf73Q8N5S3 287 aaPredicted RBP18.3■□□□□ 0.52
NDEL1-209ENST00000580738 DENND1AQ8TEH3 1009 aa18.3■□□□□ 0.52
NDEL1-209ENST00000580738 DNAJC1Q96KC8 554 aaKnown RBP18.3■□□□□ 0.52
NDEL1-209ENST00000580738 CRB3Q9BUF7 120 aa18.3■□□□□ 0.52
NDEL1-209ENST00000580738 GSTM1P09488 218 aa18.29■□□□□ 0.52
NDEL1-209ENST00000580738 ACPPP15309 386 aa18.29■□□□□ 0.52
NDEL1-209ENST00000580738 COMTP21964 271 aa18.29■□□□□ 0.52
NDEL1-209ENST00000580738 RBL1P28749 1068 aa18.29■□□□□ 0.52
NDEL1-209ENST00000580738 SOX11P35716 441 aa18.29■□□□□ 0.52
NDEL1-209ENST00000580738 GSTM4Q03013 218 aa18.29■□□□□ 0.52
NDEL1-209ENST00000580738 KLC1Q07866 573 aa18.29■□□□□ 0.52
NDEL1-209ENST00000580738 CDSNQ15517 529 aa18.29■□□□□ 0.52
NDEL1-209ENST00000580738 INAQ16352 499 aa18.29■□□□□ 0.52
NDEL1-209ENST00000580738 DBN1Q16643 649 aa18.29■□□□□ 0.52
NDEL1-209ENST00000580738 KBTBD2Q8IY47 623 aa18.29■□□□□ 0.52
NDEL1-209ENST00000580738 SIRT6Q8N6T7 355 aa18.29■□□□□ 0.52
NDEL1-209ENST00000580738 LINC01555Q8NAE3 123 aa18.29■□□□□ 0.52
NDEL1-209ENST00000580738 BRIX1Q8TDN6 353 aaKnown RBP18.29■□□□□ 0.52
NDEL1-209ENST00000580738 ELMO1Q92556 727 aa18.29■□□□□ 0.52
NDEL1-209ENST00000580738 VPS50Q96JG6 964 aa18.29■□□□□ 0.52
NDEL1-209ENST00000580738 SMARCAL1Q9NZC9 954 aa18.29■□□□□ 0.52
NDEL1-209ENST00000580738 SEC14L3Q9UDX4 400 aa18.29■□□□□ 0.52
NDEL1-209ENST00000580738 HACD1B0YJ81 288 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 PRICKLE3O43900 615 aaPredicted RBP18.28■□□□□ 0.52
NDEL1-209ENST00000580738 AP2A2O94973 939 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 MED26O95402 600 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 AP2A1O95782 977 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 PRR35P0CG20 571 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 PSMB4P28070 264 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 UBASH3AP57075 661 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 ADORA2A-AS1P86434 159 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 SPARCL1Q14515 664 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 GRM7Q14831 915 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 ATG9BQ674R7 924 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 MTFR2Q6P444 385 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 XKRXQ6PP77 449 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 SPNS3Q6ZMD2 512 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 CCDC110Q8TBZ0 833 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 HAS2Q92819 552 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 IQCDQ96DY2 449 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 C19orf43Q9BQ61 176 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 CIDEBQ9UHD4 219 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 PCNX1Q96RV3 2341 aa18.28■□□□□ 0.52
NDEL1-209ENST00000580738 hCG_1818297A0A087WSY0 165 aa18.27■□□□□ 0.52
NDEL1-209ENST00000580738 SLC5A10A0PJK1 596 aa18.27■□□□□ 0.52
NDEL1-209ENST00000580738 MAP2K7O14733 419 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms