RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 ATMQ13315 3056 aa19.43■□□□□ 0.7
SMG8-204ENST00000580498 ZSCAN9O15535 394 aaPredicted RBP19.42■□□□□ 0.7
SMG8-204ENST00000580498 ZNF749O43361 778 aa19.42■□□□□ 0.7
SMG8-204ENST00000580498 CATP04040 527 aaKnown RBP19.42■□□□□ 0.7
SMG8-204ENST00000580498 GNG11P61952 73 aa19.42■□□□□ 0.7
SMG8-204ENST00000580498 UGT8Q16880 541 aa19.42■□□□□ 0.7
SMG8-204ENST00000580498 FAM199XQ6PEV8 388 aaPredicted RBP19.42■□□□□ 0.7
SMG8-204ENST00000580498 CNSTQ6PJW8 725 aa19.42■□□□□ 0.7
SMG8-204ENST00000580498 SYDE1Q6ZW31 735 aaPredicted RBP19.42■□□□□ 0.7
SMG8-204ENST00000580498 PROKR1Q8TCW9 393 aa19.42■□□□□ 0.7
SMG8-204ENST00000580498 DHRS4Q9BTZ2 278 aa19.42■□□□□ 0.7
SMG8-204ENST00000580498 CHST8Q9H2A9 424 aa19.42■□□□□ 0.7
SMG8-204ENST00000580498 C20orf96Q9NUD7 363 aaPredicted RBP19.42■□□□□ 0.7
SMG8-204ENST00000580498 SPHK1Q9NYA1 384 aa19.42■□□□□ 0.7
SMG8-204ENST00000580498 UTP6Q9NYH9 597 aaKnown RBP19.42■□□□□ 0.7
SMG8-204ENST00000580498 SPATA7Q9P0W8 599 aa19.42■□□□□ 0.7
SMG8-204ENST00000580498 NDOR1Q9UHB4 597 aa19.42■□□□□ 0.7
SMG8-204ENST00000580498 SMAPO00193 183 aa19.41■□□□□ 0.7
SMG8-204ENST00000580498 TERTO14746 1132 aaKnown RBP19.41■□□□□ 0.7
SMG8-204ENST00000580498 NDC80O14777 642 aa19.41■□□□□ 0.7
SMG8-204ENST00000580498 C1orf105O95561 183 aa19.41■□□□□ 0.7
SMG8-204ENST00000580498 TTC4O95801 387 aa19.41■□□□□ 0.7
SMG8-204ENST00000580498 ARNTP27540 789 aa19.41■□□□□ 0.7
SMG8-204ENST00000580498 PTK6Q13882 451 aa19.41■□□□□ 0.7
SMG8-204ENST00000580498 LACTB2Q53H82 288 aaPredicted RBP19.41■□□□□ 0.7
SMG8-204ENST00000580498 CTSL3PQ5NE16 218 aa19.41■□□□□ 0.7
SMG8-204ENST00000580498 UGT3A1Q6NUS8 523 aa19.41■□□□□ 0.7
SMG8-204ENST00000580498 TMEM135Q86UB9 458 aa19.41■□□□□ 0.7
SMG8-204ENST00000580498 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.41■□□□□ 0.7
SMG8-204ENST00000580498 NAPGQ99747 312 aaPredicted RBP19.41■□□□□ 0.7
SMG8-204ENST00000580498 KCNMB2Q9Y691 235 aa19.41■□□□□ 0.7
SMG8-204ENST00000580498 FAM169AQ9Y6X4 670 aa19.41■□□□□ 0.7
SMG8-204ENST00000580498 BAHCC1Q9P281 2608 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 NIPSNAP2O75323 286 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 PIM1P11309 404 aaPredicted RBP19.4■□□□□ 0.7
SMG8-204ENST00000580498 PGAM1P18669 254 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 HSD17B2P37059 387 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 PMS2P54278 862 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 ARSFP54793 590 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 DEFB110Q30KQ9 67 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 TCTE1Q5JU00 501 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 ATP1A1-AS1Q5TC04 95 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 TAX1BP1Q86VP1 789 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 RAB43Q86YS6 212 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 ENDOVQ8N8Q3 282 aaKnown RBP19.4■□□□□ 0.7
SMG8-204ENST00000580498 NAT8LQ8N9F0 302 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 TTC29Q8NA56 475 aaPredicted RBP19.4■□□□□ 0.7
SMG8-204ENST00000580498 BIRC8Q96P09 236 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 KCNF1Q9H3M0 494 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 ACSS2Q9NR19 701 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 PCMTD2Q9NV79 361 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 KLHL42Q9P2K6 505 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 SAR1BQ9Y6B6 198 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 KALRNO60229 2985 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 SPTA1P02549 2419 aa19.4■□□□□ 0.7
SMG8-204ENST00000580498 PABPN1LA6NDY0 278 aaKnown RBP19.39■□□□□ 0.69
SMG8-204ENST00000580498 DNALI1O14645 258 aaPredicted RBP19.39■□□□□ 0.69
SMG8-204ENST00000580498 ZNF185O15231 689 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 ENO3P13929 434 aaPredicted RBP19.39■□□□□ 0.69
SMG8-204ENST00000580498 MAGP20916 626 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 RORAP35398 523 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 BDKRB1P46663 353 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 RRADP55042 308 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 YOD1Q5VVQ6 348 aaPredicted RBP19.39■□□□□ 0.69
SMG8-204ENST00000580498 LRRC8EQ6NSJ5 796 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 RHBDD2Q6NTF9 364 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 ZNF517Q6ZMY9 492 aaPredicted RBP19.39■□□□□ 0.69
SMG8-204ENST00000580498 NEK10Q6ZWH5 1172 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 C2orf73Q8N5S3 287 aaPredicted RBP19.39■□□□□ 0.69
SMG8-204ENST00000580498 KCNJ9Q92806 393 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 SLCO2A1Q92959 643 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 ZUFSPQ96AP4 578 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 FAM136AQ96C01 138 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 IP6K3Q96PC2 410 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 NRTNQ99748 197 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 DDX47Q9H0S4 455 aaKnown RBP19.39■□□□□ 0.69
SMG8-204ENST00000580498 PCYOX1Q9UHG3 505 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 TSR3Q9UJK0 312 aaKnown RBP19.39■□□□□ 0.69
SMG8-204ENST00000580498 ANAPC2Q9UJX6 822 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 TCFL5Q9UL49 500 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 NEU2Q9Y3R4 380 aa19.39■□□□□ 0.69
SMG8-204ENST00000580498 TARM1B6A8C7 271 aa19.38■□□□□ 0.69
SMG8-204ENST00000580498 CCDC188H7C350 402 aa19.38■□□□□ 0.69
SMG8-204ENST00000580498 VPS26AO75436 327 aa19.38■□□□□ 0.69
SMG8-204ENST00000580498 CCNDBP1O95273 360 aa19.38■□□□□ 0.69
SMG8-204ENST00000580498 IGHEP01854 428 aa19.38■□□□□ 0.69
SMG8-204ENST00000580498 CMPK1P30085 196 aa19.38■□□□□ 0.69
SMG8-204ENST00000580498 RPS18P62269 152 aaKnown RBP19.38■□□□□ 0.69
SMG8-204ENST00000580498 DCDP81605 110 aaKnown RBP19.38■□□□□ 0.69
SMG8-204ENST00000580498 NCF4Q15080 339 aa19.38■□□□□ 0.69
SMG8-204ENST00000580498 PTCHD3Q3KNS1 767 aa19.38■□□□□ 0.69
SMG8-204ENST00000580498 RNASEH2BQ5TBB1 312 aaKnown RBP19.38■□□□□ 0.69
SMG8-204ENST00000580498 PRAMEF17Q5VTA0 474 aa19.38■□□□□ 0.69
SMG8-204ENST00000580498 CENPUQ71F23 418 aa19.38■□□□□ 0.69
SMG8-204ENST00000580498 KCNMB4Q86W47 210 aa19.38■□□□□ 0.69
SMG8-204ENST00000580498 APLFQ8IW19 511 aaPredicted RBP19.38■□□□□ 0.69
SMG8-204ENST00000580498 PALM2Q8IXS6 379 aa19.38■□□□□ 0.69
SMG8-204ENST00000580498 PDIK1LQ8N165 341 aa19.38■□□□□ 0.69
SMG8-204ENST00000580498 ZNF655Q8N720 491 aaPredicted RBP19.38■□□□□ 0.69
SMG8-204ENST00000580498 SLC38A9Q8NBW4 561 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms