RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ZSCAN1Q8NBB4 408 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 GPR26Q8NDV2 337 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 JPH3Q8WXH2 748 aaPredicted RBP9.94□□□□□ -0.82
SS18-210ENST00000578700 INPP5DQ92835 1189 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 TSACCQ96A04 125 aaPredicted RBP9.94□□□□□ -0.82
SS18-210ENST00000578700 RAB7BQ96AH8 199 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 CCDC74AQ96AQ1 378 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 EID2BQ96D98 161 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 THOC1Q96FV9 657 aaKnown RBP9.94□□□□□ -0.82
SS18-210ENST00000578700 LIN37Q96GY3 246 aaPredicted RBP9.94□□□□□ -0.82
SS18-210ENST00000578700 RILPQ96NA2 401 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 BIRC8Q96P09 236 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 GPR78Q96P69 363 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 GPR21Q99679 349 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 ZSCAN5AQ9BUG6 496 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 LRRC61Q9BV99 259 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 C1QTNF2Q9BXJ5 285 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 DERL2Q9GZP9 239 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 ILKAPQ9H0C8 392 aaPredicted RBP9.94□□□□□ -0.82
SS18-210ENST00000578700 P2RY12Q9H244 342 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 STN1Q9H668 368 aaKnown RBP9.94□□□□□ -0.82
SS18-210ENST00000578700 ALG9Q9H6U8 611 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 ACTR5Q9H9F9 607 aaPredicted RBP9.94□□□□□ -0.82
SS18-210ENST00000578700 KCTD5Q9NXV2 234 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 GPR34Q9UPC5 381 aa9.94□□□□□ -0.82
SS18-210ENST00000578700 OAS3Q9Y6K5 1087 aaKnown RBP9.94□□□□□ -0.82
SS18-210ENST00000578700 A0A0U1RQS6 177 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 TMX2-CTNND1H3BSU7 103 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 KPNA5O15131 536 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 AP1G1O43747 822 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 OR1I1O60431 355 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 DLX3O60479 287 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 NPHS1O60500 1241 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 SNX2O60749 519 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 NIPSNAP2O75323 286 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 IPO13O94829 963 aaKnown RBP9.93□□□□□ -0.82
SS18-210ENST00000578700 SFTPCP11686 197 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 GFAPP14136 432 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 CD1DP15813 335 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 UGT1A6P19224 532 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 MSH3P20585 1137 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 UGT1A1P22309 533 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 UGT1A4P22310 534 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 LHCGRP22888 699 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 UGT1A3P35503 534 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 IGFALSP35858 605 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 MMP12P39900 470 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 NAGLUP54802 743 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 AQP5P55064 265 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 TLE1Q04724 770 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 DLG1Q12959 904 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 PRKAA1Q13131 559 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 RCN2Q14257 317 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 LDLRAP1Q5SW96 308 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 CGB2Q6NT52 195 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 PAQR3Q6TCH7 311 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 ENPP7Q6UWV6 458 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 XKR5Q6UX68 686 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 MACC1Q6ZN28 852 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 MYO1HQ8N1T3 1032 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 TRAM1L1Q8N609 369 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 KYQ8NBH2 561 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 SIDT2Q8NBJ9 832 aaKnown RBP9.93□□□□□ -0.82
SS18-210ENST00000578700 CXorf40AQ8TE69 158 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 ANKRD49Q8WVL7 239 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 USP7Q93009 1102 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 KIAA1191Q96A73 305 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 FAM136AQ96C01 138 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 LINGO1Q96FE5 620 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 CNDP1Q96KN2 507 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 TMEM74Q96NL1 305 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 TRMOQ9BU70 441 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 TUBB6Q9BUF5 446 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 TMEM120AQ9BXJ8 343 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 ZCCHC2Q9C0B9 1178 aaKnown RBP9.93□□□□□ -0.82
SS18-210ENST00000578700 DRC3Q9H069 523 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 LRRN3Q9H3W5 708 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 MBNL1Q9NR56 388 aaKnown RBP9.93□□□□□ -0.82
SS18-210ENST00000578700 SPATS2LQ9NUQ6 558 aaKnown RBP9.93□□□□□ -0.82
SS18-210ENST00000578700 SMOXQ9NWM0 555 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 NFKBIL1Q9UBC1 381 aaPredicted RBP9.93□□□□□ -0.82
SS18-210ENST00000578700 DNAJC16Q9Y2G8 782 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.93□□□□□ -0.82
SS18-210ENST00000578700 RAP2CQ9Y3L5 183 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 LOXL2Q9Y4K0 774 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 PCDHB11Q9Y5F2 797 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 PCDHGA7Q9Y5G6 932 aa9.93□□□□□ -0.82
SS18-210ENST00000578700 USP9YO00507 2555 aaPredicted RBP9.93□□□□□ -0.82
SS18-210ENST00000578700 SPTAN1Q13813 2472 aaKnown RBP9.93□□□□□ -0.82
SS18-210ENST00000578700 PRAMEF33A0A0G2JMD5 474 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 AGAP14A8MT82 685 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 SUPT3HB4E1H0 165 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 BTN3A1O00481 513 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 ZBTB14O43829 449 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 PRAMEF10O60809 474 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 CCDC22O60826 627 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 KERAO60938 352 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 SUPT3HO75486 399 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 ATP5HO75947 161 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 TM7SF2O76062 418 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms