RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 FER1L6-AS2Q96M78 137 aa13.97□□□□□ -0.17
SMARCE1-213ENST00000578044 SLC7A5P2Q9GIP4 190 aa13.97□□□□□ -0.17
SMARCE1-213ENST00000578044 SLC26A1Q9H2B4 701 aa13.97□□□□□ -0.17
SMARCE1-213ENST00000578044 XKR8Q9H6D3 395 aa13.97□□□□□ -0.17
SMARCE1-213ENST00000578044 WDR54Q9H977 334 aa13.97□□□□□ -0.17
SMARCE1-213ENST00000578044 PIH1D1Q9NWS0 290 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-213ENST00000578044 GNPTGQ9UJJ9 305 aa13.97□□□□□ -0.17
SMARCE1-213ENST00000578044 ICE1Q9Y2F5 2266 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 K7EM74 188 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 RASGRF2O14827 1237 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 PRICKLE3O43900 615 aaPredicted RBP13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 SRPX2O60687 465 aaPredicted RBP13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 DPM1O60762 260 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 SORBS2O94875 1100 aaKnown RBP13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 PIM1P11309 404 aaPredicted RBP13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 PVRP15151 417 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 PTGIRP43119 386 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 HSPA14Q0VDF9 509 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 GRB7Q14451 532 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 GBX1Q14549 363 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 TYSND1Q2T9J0 566 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 TCTE1Q5JU00 501 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 COLEC12Q5KU26 742 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 LCN10Q6JVE6 187 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 MRNIPQ6NTE8 343 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 LRRC8BQ6P9F7 803 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 TTC23LQ6PF05 361 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 IGFL3Q6UXB1 125 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 RAB42Q8N4Z0 105 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 ZBTB2Q8N680 514 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 SPC24Q8NBT2 197 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 RAD51AP1Q96B01 352 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 PTERQ96BW5 349 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 CHRAC1Q9NRG0 131 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 SPHK1Q9NYA1 384 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 KLHL42Q9P2K6 505 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 VPS9D1Q9Y2B5 631 aa13.96□□□□□ -0.17
SMARCE1-213ENST00000578044 DOPEY1Q5JWR5 2465 aa13.96□□□□□ -0.18
SMARCE1-213ENST00000578044 MAGEB16A2A368 324 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 FITM1A5D6W6 292 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 PYCARD-AS1I3L0S3 204 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 PHF2O75151 1096 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 IPO13O94829 963 aaKnown RBP13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 ESR1P03372 595 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 PDGFAP04085 211 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 MLNP12872 115 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 PEBP1P30086 187 aaKnown RBP13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 EMP3P54852 163 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 SARNPP82979 210 aaKnown RBP13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 RELAQ04206 551 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 SEMA3AQ14563 771 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 NKAIN1Q4KMZ8 207 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 PRAMEF17Q5VTA0 474 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 SDCCAG8Q86SQ7 713 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 FAM26EQ8N5C1 309 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 LMNTD1Q8N9Z9 388 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 LINC01555Q8NAE3 123 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 NDC1Q9BTX1 674 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 TXLNGQ9NUQ3 528 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 EURLQ9NYK6 297 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 GPR83Q9NYM4 423 aa13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 TTC7AQ9ULT0 858 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 TDRKHQ9Y2W6 561 aaKnown RBP13.95□□□□□ -0.18
SMARCE1-213ENST00000578044 ARGFXA6NJG6 315 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 ISM1B1AKI9 464 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 DNAJB5O75953 348 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 MATN4O95460 622 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 FGGP02679 453 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 ERGP11308 486 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 OGNP20774 298 aaKnown RBP13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 ARNTP27540 789 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 CCL11P51671 97 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 SRSF1Q07955 248 aaKnown RBP eCLIP13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 ARHGAP19Q14CB8 494 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 PTCHD3Q3KNS1 767 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 VWA5B1Q5TIE3 1220 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 CPZQ66K79 652 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 PTRHD1Q6GMV3 140 aaKnown RBP13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 KIAA0930Q6ICG6 404 aaPredicted RBP13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 OTOAQ7RTW8 1153 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 MRGPREQ86SM8 312 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 VRK3Q8IV63 474 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 LMNTD2Q8IXW0 634 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 GSDMBQ8TAX9 411 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 PNPLA2Q96AD5 504 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 FOPNLQ96NB1 174 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 BIRC8Q96P09 236 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 SPATA7Q9P0W8 599 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 NXT1Q9UKK6 140 aaKnown RBP13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 SOX13Q9UN79 622 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 MAP4K5Q9Y4K4 846 aa13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 MDC1Q14676 2089 aaKnown RBP13.94□□□□□ -0.18
SMARCE1-213ENST00000578044 A0A1B0GX78 115 aa13.93□□□□□ -0.18
SMARCE1-213ENST00000578044 NRDCO43847 1150 aa13.93□□□□□ -0.18
SMARCE1-213ENST00000578044 NDUFS3O75489 264 aa13.93□□□□□ -0.18
SMARCE1-213ENST00000578044 ALPPP05187 535 aa13.93□□□□□ -0.18
SMARCE1-213ENST00000578044 ETS1P14921 441 aa13.93□□□□□ -0.18
SMARCE1-213ENST00000578044 PAMP19021 973 aa13.93□□□□□ -0.18
SMARCE1-213ENST00000578044 NR1D1P20393 614 aa13.93□□□□□ -0.18
SMARCE1-213ENST00000578044 HSD17B2P37059 387 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms