RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 MAPK10P53779 464 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 EPHA4P54764 986 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 E2F1Q01094 437 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 GSTM4Q03013 218 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 ZFP36L1Q07352 338 aaKnown RBP7.66□□□□□ -1.18
CCDC40-215ENST00000576033 CYP4F3Q08477 520 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 DLG1Q12959 904 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 RPA4Q13156 261 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 NAB1Q13506 487 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 PHKG1Q16816 387 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 ZXDCQ2QGD7 858 aaPredicted RBP7.66□□□□□ -1.18
CCDC40-215ENST00000576033 DEFB110Q30KQ9 67 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 C18orf21Q32NC0 220 aaPredicted RBP7.66□□□□□ -1.18
CCDC40-215ENST00000576033 FBXO48Q5FWF7 155 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 PLEKHS1Q5SXH7 462 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 SLC26A11Q86WA9 606 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 TMPRSS12Q86WS5 348 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 RASGRP3Q8IV61 690 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 OR6C4Q8NGE1 309 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 ASZ1Q8WWH4 475 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 LCN9Q8WX39 176 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 ZNF317Q96PQ6 595 aaPredicted RBP7.66□□□□□ -1.18
CCDC40-215ENST00000576033 MAP3K3Q99759 626 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 EPN3Q9H201 632 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 CCDC68Q9H2F9 335 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 TRIT1Q9H3H1 467 aaKnown RBP7.66□□□□□ -1.18
CCDC40-215ENST00000576033 RHOJQ9H4E5 214 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 ABCF3Q9NUQ8 709 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 MKS1Q9NXB0 559 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 SLC39A10Q9ULF5 831 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 DHRS7Q9Y394 339 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 MSRB2Q9Y3D2 182 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 SMG1Q96Q15 3661 aaKnown RBP7.66□□□□□ -1.18
CCDC40-215ENST00000576033 FER1L5A0AVI2 2057 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 PKD1L2Q7Z442 2459 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 EPG5Q9HCE0 2579 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 TEX51A0A1B0GUA7 166 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 A0A1W2PPV9 198 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 FAM221BA6H8Z2 402 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 EFCAB7A8K855 629 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 C9orf172C9J069 976 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 TAF4O00268 1085 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 TIAF1O95411 115 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 MATN4O95460 622 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 C9P02748 559 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 CAPNS1P04632 268 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 CHRM5P08912 532 aaPredicted RBP7.65□□□□□ -1.18
CCDC40-215ENST00000576033 EBLN1P0CF75 366 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 ATXN8OSP0DMR3 200 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 FGF3P11487 239 aaPredicted RBP7.65□□□□□ -1.18
CCDC40-215ENST00000576033 TPRP12270 2363 aaKnown RBP7.65□□□□□ -1.18
CCDC40-215ENST00000576033 CHN1P15882 459 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 ST6GAL1P15907 406 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 UGT2B7P16662 529 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 ZNF37AP17032 561 aaPredicted RBP7.65□□□□□ -1.18
CCDC40-215ENST00000576033 CCKBRP32239 447 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 GP5P40197 560 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 CCNFP41002 786 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 GPLD1P80108 840 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 SHC2P98077 582 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 SLC18A2Q05940 514 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 PDAP1Q13442 181 aaKnown RBP7.65□□□□□ -1.18
CCDC40-215ENST00000576033 ZIC1Q15915 447 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 PRAMEF17Q5VTA0 474 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 FAM45BPQ6NSW5 357 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 TMEM71Q6P5X7 295 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 SUSD1Q6UWL2 747 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 UNQ6494/PRO21346Q6UXR6 183 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 TIFABQ6ZNK6 161 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 RGS9BPQ6ZS82 235 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 KIAA0408Q6ZU52 694 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 GALNT7Q86SF2 657 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 AMIGO1Q86WK6 493 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 FAM129CQ86XR2 697 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 DCUN1D3Q8IWE4 304 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 LMNTD2Q8IXW0 634 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 GALNT15Q8N3T1 639 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 AVL9Q8NBF6 648 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 OR4D9Q8NGE8 314 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 FAM45AQ8TCE6 357 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 INPP5DQ92835 1189 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 CRELD1Q96HD1 420 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 NAF1Q96HR8 494 aaKnown RBP7.65□□□□□ -1.18
CCDC40-215ENST00000576033 FCRL4Q96PJ5 515 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 PKP4Q99569 1192 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 GPR22Q99680 433 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 TSSK1BQ9BXA7 367 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 SRMSQ9H3Y6 488 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 UCK1Q9HA47 277 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 ASCL3Q9NQ33 180 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 LATS2Q9NRM7 1088 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 HRASLS2Q9NWW9 162 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 SIDT1Q9NXL6 827 aaKnown RBP7.65□□□□□ -1.18
CCDC40-215ENST00000576033 UTP6Q9NYH9 597 aaKnown RBP7.65□□□□□ -1.18
CCDC40-215ENST00000576033 ACTR10Q9NZ32 417 aa7.65□□□□□ -1.18
CCDC40-215ENST00000576033 KMT2BQ9UMN6 2715 aaPredicted RBP7.65□□□□□ -1.19
CCDC40-215ENST00000576033 SPTBP11277 2137 aa7.64□□□□□ -1.19
CCDC40-215ENST00000576033 CCDC187A0A096LP49 1063 aa7.64□□□□□ -1.19
CCDC40-215ENST00000576033 A0A1W2PPM1 405 aa7.64□□□□□ -1.19
CCDC40-215ENST00000576033 SLC9B1P1A6NJY1 282 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms