RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 SHMT2P34897 504 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 GRIA1P42261 906 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 VPS41P49754 854 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 ITGA8P53708 1063 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 SESN2P58004 480 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 TLE1Q04724 770 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 SEMA5AQ13591 1074 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 MORF4L2Q15014 288 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 TRADDQ15628 312 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 UAP1Q16222 522 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 TTMPQ5BVD1 217 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 AARS2Q5JTZ9 985 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 TAOK1Q7L7X3 1001 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 NLRP9Q7RTR0 991 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 TMEM135Q86UB9 458 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 GPR135Q8IZ08 494 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 GLIS1Q8NBF1 620 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 ABHD17AQ96GS6 310 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 RANBP9Q96S59 729 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 NRTNQ99748 197 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 PHACTR1Q9C0D0 580 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 TFB2MQ9H5Q4 396 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 ACTR5Q9H9F9 607 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 TMBIM4Q9HC24 238 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 CASS4Q9NQ75 786 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 CATSPERZQ9NTU4 200 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 IRAK4Q9NWZ3 460 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 ACTR10Q9NZ32 417 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 ICKQ9UPZ9 632 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 PCDHGA6Q9Y5G7 932 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 KCNMB2Q9Y691 235 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 MED13Q9UHV7 2174 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 ASH1LQ9NR48 2969 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 ERICH4A6NGS2 130 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 E7EQ34 232 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 DNALI1O14645 258 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 TERTO14746 1132 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 RGS16O15492 202 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 RIPK2O43353 540 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 ZSCAN5DPP0CG00 497 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 UGT2B7P16662 529 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 PTPN4P29074 926 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 CSRP3P50461 194 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 ITGA1P56199 1179 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 GNGT1P63211 74 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 PLOD1Q02809 727 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 HSPA14Q0VDF9 509 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 ABRQ12979 859 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 TMED2Q15363 201 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 TRIP13Q15645 432 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 DEFB110Q30KQ9 67 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 ZNF658BQ4V348 819 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 PRAMEF17Q5VTA0 474 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 SPESP1Q6UW49 350 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 C4orf22Q6V702 233 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 CENPUQ71F23 418 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 SYVN1Q86TM6 617 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 TRIM73Q86UV7 250 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 TBC1D21Q8IYX1 336 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 ADGRF3Q8IZF5 1079 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 C19orf47Q8N9M1 422 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 OR1L3Q8NH93 324 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 OR5K2Q8NHB8 316 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 CFAP61Q8NHU2 1237 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 GSDMBQ8TAX9 411 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 ZNF778Q96MU6 729 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 TRAPPC9Q96Q05 1148 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 GPR87Q9BY21 358 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 TXLNGYQ9BZA5 131 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 ROPN1BQ9BZX4 212 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 CHST8Q9H2A9 424 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 AKIRIN1Q9H9L7 192 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 PPCSQ9HAB8 311 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 ROPN1Q9HAT0 212 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 SYTL2Q9HCH5 934 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 LATS2Q9NRM7 1088 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 POLG2Q9UHN1 485 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 SERTAD3Q9UJW9 196 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 RIMKLBQ9ULI2 386 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 PLAGL1Q9UM63 463 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 SNX7Q9UNH6 387 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 FARSAQ9Y285 508 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 TP53TG5Q9Y2B4 290 aa9.35□□□□□ -0.91
NPLOC4-216ENST00000574344 SEC16AO15027 2179 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 A0A0J9YY10 115 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 SLC5A10A0PJK1 596 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 ISM1B1AKI9 464 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 C9J4A7 227 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 SHOX2O60902 331 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 RPN2P04844 631 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 APOA4P06727 396 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 CHRM5P08912 532 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 HPDP32754 393 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 PHBP35232 272 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 RPL22P35268 128 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 TTPAP49638 278 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 GYS2P54840 703 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 CRADDP78560 199 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 GPS1Q13098 491 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms