RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 EFTUD2Q15029 972 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 SLC5A12Q1EHB4 618 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 TBC1D25Q3MII6 688 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 DCAF12Q5T6F0 453 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 LGSNQ5TDP6 509 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 CEACAM20Q6UY09 585 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 RAPH1Q70E73 1250 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 MRRFQ96E11 262 aaKnown RBP12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 CCDC138Q96M89 665 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 ZPBPQ9BS86 351 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 SLC12A9Q9BXP2 914 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 ANKZF1Q9H8Y5 726 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 FANCEQ9HB96 536 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 PDE7BQ9NP56 450 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 FBXO8Q9NRD0 319 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 SLC39A1Q9NY26 324 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 CIDEBQ9UHD4 219 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 PCDHGA7Q9Y5G6 932 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 SNRNP200O75643 2136 aaKnown RBP12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 IGHV5-51A0A0C4DH38 117 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 A0A0J9YY10 115 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 POLR1CO15160 346 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 NVLO15381 856 aaKnown RBP12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 RIPK2O43353 540 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 FAM155BO75949 473 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 TUBBP07437 444 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 FAM153BP0C7A2 387 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 TPBGLP0DKB5 382 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 FGF3P11487 239 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 UGT2B7P16662 529 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 ITIH1P19827 911 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 CNTFP26441 200 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 CD82P27701 267 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 OAS2P29728 719 aaKnown RBP12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 PNLIPRP1P54315 467 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 AP1S2P56377 157 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 PPP1CAP62136 330 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 MC2RQ01718 297 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 GRB7Q14451 532 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 IL11RAQ14626 422 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 SF1Q15637 639 aaKnown RBP12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 CYP2A13Q16696 494 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 FAM153CQ494X1 144 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 FBXO38Q6PIJ6 1188 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 FRA10AC1Q70Z53 315 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 BPHLQ86WA6 291 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 CEP97Q8IW35 865 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 SYTL1Q8IYJ3 562 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 MDM1Q8TC05 714 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 SLC44A1Q8WWI5 657 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 ATL1Q8WXF7 558 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 ZCCHC14Q8WYQ9 949 aaKnown RBP12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 SMPDL3AQ92484 453 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 FGF11Q92914 225 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 SLC41A2Q96JW4 573 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 IL17FQ96PD4 163 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 PAFAH2Q99487 392 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 PKP4Q99569 1192 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 MENTQ9BUN1 341 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 DDA1Q9BW61 102 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 TMEM121BQ9BXQ6 578 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 PITPNM3Q9BZ71 974 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 DERL2Q9GZP9 239 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 OCIAD1Q9NX40 245 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 CTNNAL1Q9UBT7 734 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 ZNF180Q9UJW8 692 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 TLK1Q9UKI8 766 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 NOVA2Q9UNW9 492 aaKnown RBP12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 BTRCQ9Y297 605 aa12.34□□□□□ -0.43
TRAPPC1-206ENST00000573989 SLC9B1P1A6NJY1 282 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 CDRT15L2A8MXV6 281 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 POC1B-GALNT4F8VUJ3 575 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 KRT37O76014 449 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 CCNDBP1O95273 360 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 TSPAN12O95859 305 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 CCDC166P0CW27 439 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 ERGP11308 486 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 CCL4P13236 92 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 CCND1P24385 295 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 RPA3P35244 121 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 SERPINB8P50452 374 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 PCBP4P57723 403 aaKnown RBP12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 ATP6V0D1P61421 351 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 TSTA3Q13630 321 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 SLC29A2Q14542 456 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 ZNF460Q14592 562 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 ZKSCAN8Q15776 578 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 CCSMST1Q4G0I0 132 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 TAF1BQ53T94 588 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 MROH9Q5TGP6 573 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 WDR93Q6P2C0 686 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 CLEC14AQ86T13 490 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 ADAMTSL2Q86TH1 951 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 TBC1D1Q86TI0 1168 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 TAX1BP1Q86VP1 789 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 GSPT2Q8IYD1 628 aaKnown RBP12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 D2HGDHQ8N465 521 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 LINC01555Q8NAE3 123 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms