RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ITGA2BP08514 1039 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 CHRM5P08912 532 aaPredicted RBP10.68□□□□□ -0.7
CHD3-216ENST00000573936 MYBL2P10244 700 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 CYP2A7P20853 494 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 SAT1P21673 171 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 CDH3P22223 829 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 PKLRP30613 574 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 TSPAN7P41732 249 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 ARL4DP49703 201 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 PMS2P54278 862 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 ERVPABLB-1P60509 514 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 CXADRP78310 365 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 SP140Q13342 867 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 USP10Q14694 798 aaKnown RBP10.68□□□□□ -0.7
CHD3-216ENST00000573936 ARHGAP19Q14CB8 494 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 C16orf72Q14CZ0 275 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 TMEM164Q5U3C3 297 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 BROXQ5VW32 411 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 WDR93Q6P2C0 686 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 FOXR1Q6PIV2 292 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 FAM92BQ6ZTR7 304 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 GSPT2Q8IYD1 628 aaKnown RBP10.68□□□□□ -0.7
CHD3-216ENST00000573936 ADGRF3Q8IZF5 1079 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 CNPY4Q8N129 248 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 OR2L8Q8NGY9 312 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 MCOLN3Q8TDD5 553 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 EEF1AKMT1Q8WVE0 214 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 KLHL6Q8WZ60 621 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 ANKRD7Q92527 254 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 LINGO1Q96FE5 620 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 PDLIM5Q96HC4 596 aaKnown RBP10.68□□□□□ -0.7
CHD3-216ENST00000573936 ZNF578Q96N58 590 aaPredicted RBP10.68□□□□□ -0.7
CHD3-216ENST00000573936 SLC46A1Q96NT5 459 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 TAAR9Q96RI9 348 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 GPR22Q99680 433 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 OLFM1Q99784 485 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 PARD6BQ9BYG5 372 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 TRIM54Q9BYV2 358 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 ACSS3Q9H6R3 686 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 THSD1Q9NS62 852 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 ACTR10Q9NZ32 417 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 TSR3Q9UJK0 312 aaKnown RBP10.68□□□□□ -0.7
CHD3-216ENST00000573936 POMT2Q9UKY4 750 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 IKBKGQ9Y6K9 419 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 PIKFYVEQ9Y2I7 2098 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 RP1P56715 2156 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 EFCAB7A8K855 629 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 ARHGEF33A8MVX0 844 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 ISM1B1AKI9 464 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 MYO1CO00159 1063 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 BRINP1O60477 761 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 PIAS1O75925 651 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 C1QL1O75973 258 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 TNFSF15O95150 251 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 FKBP9O95302 570 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 ACSL3O95573 720 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 ZBTB11O95625 1053 aaPredicted RBP10.67□□□□□ -0.7
CHD3-216ENST00000573936 C1QAP02745 245 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 ABHD2P08910 425 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 HIST1H2AGP0C0S8 130 aaPredicted RBP10.67□□□□□ -0.7
CHD3-216ENST00000573936 TPBGLP0DKB5 382 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 STMN1P16949 149 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 NELFEP18615 380 aaKnown RBP10.67□□□□□ -0.7
CHD3-216ENST00000573936 HIST1H2ADP20671 130 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 PRDX3P30048 256 aaKnown RBP10.67□□□□□ -0.7
CHD3-216ENST00000573936 BDKRB1P46663 353 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 KPNA2P52292 529 aaKnown RBP10.67□□□□□ -0.7
CHD3-216ENST00000573936 MAPK10P53779 464 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 RAB15P59190 212 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 TAS2R39P59534 338 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 MC2RQ01718 297 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 SLC5A12Q1EHB4 618 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 TMTC4Q5T4D3 741 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 ANKS6Q68DC2 871 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 UBE2R2Q712K3 238 aaPredicted RBP10.67□□□□□ -0.7
CHD3-216ENST00000573936 TAOK1Q7L7X3 1001 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 PIWIL4Q7Z3Z4 852 aaKnown RBP10.67□□□□□ -0.7
CHD3-216ENST00000573936 FAM129CQ86XR2 697 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 ZNF843Q8N446 348 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 HMGCLL1Q8TB92 370 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 PRR11Q96HE9 360 aaPredicted RBP10.67□□□□□ -0.7
CHD3-216ENST00000573936 HIST1H2AHQ96KK5 128 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 MAP3K3Q99759 626 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 HIST1H2AJQ99878 128 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 ZPBPQ9BS86 351 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 H2AFJQ9BTM1 129 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 SLC12A9Q9BXP2 914 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 PARVBQ9HBI1 364 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 FBXO8Q9NRD0 319 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 SLC39A1Q9NY26 324 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 PISDQ9UG56 409 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 RAB21Q9UL25 225 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 PLAGL1Q9UM63 463 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 RUVBL2Q9Y230 463 aaKnown RBP10.67□□□□□ -0.7
CHD3-216ENST00000573936 MTO1Q9Y2Z2 717 aaKnown RBP10.67□□□□□ -0.7
CHD3-216ENST00000573936 PCDHB11Q9Y5F2 797 aa10.67□□□□□ -0.7
CHD3-216ENST00000573936 COL27A1Q8IZC6 1860 aaPredicted RBP10.67□□□□□ -0.7
CHD3-216ENST00000573936 BOD1L1Q8NFC6 3051 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 IGHV5-51A0A0C4DH38 117 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 NVLO15381 856 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms