RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 PTSQ03393 145 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 C5orf22Q49AR2 442 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 TIGD2Q4W5G0 525 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 Q6ZS52 159 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 RPS27LQ71UM5 84 aaKnown RBP9.86□□□□□ -0.83
SMG6-213ENST00000573166 ALYREFQ86V81 257 aaKnown RBP9.86□□□□□ -0.83
SMG6-213ENST00000573166 SYNPOQ8N3V7 929 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 LTB4R2Q9NPC1 389 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 GPN3Q9UHW5 284 aaPredicted RBP9.86□□□□□ -0.83
SMG6-213ENST00000573166 MUTYHQ9UIF7 546 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 PCDHB11Q9Y5F2 797 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 ZNF780BQ9Y6R6 833 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 MYO1GB0I1T2 1018 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 BHMG1C9JSJ3 638 aaPredicted RBP9.85□□□□□ -0.83
SMG6-213ENST00000573166 MOSPD3O75425 235 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 EPN2O95208 641 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 TGFB1P01137 390 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 NDUFV2P19404 249 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 FDXRP22570 491 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 NFKB2Q00653 900 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 C2orf80Q0P641 193 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 STX4Q12846 297 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 USP30Q70CQ3 517 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 ZNF534Q76KX8 674 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 TTC29Q8NA56 475 aaPredicted RBP9.85□□□□□ -0.83
SMG6-213ENST00000573166 ICA1LQ8NDH6 482 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 GPR150Q8NGU9 434 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 HCAR2Q8TDS4 363 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 RSPRY1Q96DX4 576 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 CCT7Q99832 543 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 MVB12BQ9H7P6 319 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 KIF17Q9P2E2 1029 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 LOC730098B7Z3J9 87 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 PFDN1O60925 122 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 SLC22A3O75751 556 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 TGDSO95455 350 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 CD1DP15813 335 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 CR2P20023 1033 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 AGTR2P50052 363 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 TBL3Q12788 808 aaKnown RBP9.85□□□□□ -0.83
SMG6-213ENST00000573166 WSCD2Q2TBF2 565 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 ISLR2Q6UXK2 745 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 MACC1Q6ZN28 852 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 USP53Q70EK8 1073 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 ADHFE1Q8IWW8 467 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 FITM2Q8N6M3 262 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 OR52E6Q96RD3 313 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 PANX1Q96RD7 426 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 CLEC1BQ9P126 229 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 FBXW2Q9UKT8 454 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 MGAMO43451 1857 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 SAP18O00422 153 aaKnown RBP9.85□□□□□ -0.83
SMG6-213ENST00000573166 BCAT2O15382 392 aaPredicted RBP9.85□□□□□ -0.83
SMG6-213ENST00000573166 GSTM1P09488 218 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 MPC1LP0DKB6 136 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 AK4P27144 223 aaPredicted RBP9.85□□□□□ -0.83
SMG6-213ENST00000573166 MLLT3P42568 568 aaPredicted RBP9.85□□□□□ -0.83
SMG6-213ENST00000573166 DUSP3P51452 185 aaPredicted RBP9.85□□□□□ -0.83
SMG6-213ENST00000573166 ESRRGP62508 458 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 HMGCS1Q01581 520 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 GSTM4Q03013 218 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 UBAP2LQ14157 1087 aaKnown RBP9.85□□□□□ -0.83
SMG6-213ENST00000573166 ADGRE1Q14246 886 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 TMIGD1Q6UXZ0 262 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 MBOAT1Q6ZNC8 495 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.85□□□□□ -0.83
SMG6-213ENST00000573166 MRGPRX1Q96LB2 322 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 DPYSL5Q9BPU6 564 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 TBCDQ9BTW9 1192 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 IL21RQ9HBE5 538 aa9.85□□□□□ -0.83
SMG6-213ENST00000573166 LEF1Q9UJU2 399 aaPredicted RBP9.85□□□□□ -0.83
SMG6-213ENST00000573166 H7BY64 318 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 ZNF682O95780 498 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 STATHP02808 62 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 BUD31P41223 144 aaPredicted RBP9.84□□□□□ -0.83
SMG6-213ENST00000573166 MANFP55145 182 aaKnown RBP9.84□□□□□ -0.83
SMG6-213ENST00000573166 FRG2Q64ET8 278 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 C6orf89Q6UWU4 347 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 ST13P4Q8IZP2 240 aaPredicted RBP9.84□□□□□ -0.83
SMG6-213ENST00000573166 CENPLQ8N0S6 344 aaPredicted RBP9.84□□□□□ -0.83
SMG6-213ENST00000573166 SPEM1Q8N4L4 309 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 TTLQ8NG68 377 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 PRAP1Q96NZ9 151 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 FRG2BQ96QU4 278 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 UHRF1Q96T88 793 aaPredicted RBP9.84□□□□□ -0.83
SMG6-213ENST00000573166 C1orf109Q9NX04 203 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 FZD4Q9ULV1 537 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 OR6C74A6NCV1 312 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 MROH6A6NGR9 719 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 OR52A4PA6NMU1 304 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 KCNJ13O60928 360 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 LHCGRP22888 699 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 RPS3P23396 243 aaKnown RBP eCLIP9.84□□□□□ -0.83
SMG6-213ENST00000573166 PTPN4P29074 926 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 CSTF2P33240 577 aaKnown RBP eCLIP9.84□□□□□ -0.83
SMG6-213ENST00000573166 NEK2P51955 445 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 HHEXQ03014 270 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 LRRC23Q53EV4 343 aaPredicted RBP9.84□□□□□ -0.83
SMG6-213ENST00000573166 CPTPQ5TA50 214 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 GOLGA7Q7Z5G4 137 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms