RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 PPP3CCP48454 512 aa10.94□□□□□ -0.66
RPAIN-212ENST00000573126 SPIDRQ14159 915 aa10.94□□□□□ -0.66
RPAIN-212ENST00000573126 MYBPC3Q14896 1274 aa10.94□□□□□ -0.66
RPAIN-212ENST00000573126 PTCHD3Q3KNS1 767 aa10.94□□□□□ -0.66
RPAIN-212ENST00000573126 LYPLAL1Q5VWZ2 237 aa10.94□□□□□ -0.66
RPAIN-212ENST00000573126 TTC23Q5W5X9 447 aa10.94□□□□□ -0.66
RPAIN-212ENST00000573126 GAREM2Q75VX8 874 aa10.94□□□□□ -0.66
RPAIN-212ENST00000573126 GPR149Q86SP6 731 aa10.94□□□□□ -0.66
RPAIN-212ENST00000573126 GALNT10Q86SR1 603 aa10.94□□□□□ -0.66
RPAIN-212ENST00000573126 CMTM8Q8IZV2 173 aa10.94□□□□□ -0.66
RPAIN-212ENST00000573126 ZNF555Q8NEP9 628 aa10.94□□□□□ -0.66
RPAIN-212ENST00000573126 PXYLP1Q8TE99 480 aa10.94□□□□□ -0.66
RPAIN-212ENST00000573126 SNX19Q92543 992 aa10.94□□□□□ -0.66
RPAIN-212ENST00000573126 VOPP1Q96AW1 172 aa10.94□□□□□ -0.66
RPAIN-212ENST00000573126 APOLD1Q96LR9 279 aa10.94□□□□□ -0.66
RPAIN-212ENST00000573126 PPT2Q9UMR5 302 aa10.94□□□□□ -0.66
RPAIN-212ENST00000573126 SLC22A14Q9Y267 594 aa10.94□□□□□ -0.66
RPAIN-212ENST00000573126 HPRP00739 348 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 PFKLP17858 780 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 SDC1P18827 310 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 NR4A1P22736 598 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 DCTP40126 519 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 MAPK8P45983 427 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 NRIP1P48552 1158 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 PTSQ03393 145 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 CD47Q08722 323 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 CES5AQ6NT32 575 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 NEK5Q6P3R8 708 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 SERPINA13PQ6UXR4 307 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 CHDHQ8NE62 594 aaPredicted RBP10.93□□□□□ -0.66
RPAIN-212ENST00000573126 TBC1D15Q8TC07 691 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 FNDC8Q8TC99 324 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 MIPOL1Q8TD10 442 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 TANKQ92844 425 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 SCRN2Q96FV2 425 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 APIPQ96GX9 242 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 RBM4BQ9BQ04 359 aaKnown RBP10.93□□□□□ -0.66
RPAIN-212ENST00000573126 CPPED1Q9BRF8 314 aaPredicted RBP10.93□□□□□ -0.66
RPAIN-212ENST00000573126 RBM4Q9BWF3 364 aaKnown RBP10.93□□□□□ -0.66
RPAIN-212ENST00000573126 EBPLQ9BY08 206 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 DGCR6LQ9BY27 220 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 ATG10Q9H0Y0 220 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 ZDHHC6Q9H6R6 413 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 PLGRKTQ9HBL7 147 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 ABCB8Q9NUT2 735 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 ZDHHC3Q9NYG2 299 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 GPRC5BQ9NZH0 403 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 CIDEBQ9UHD4 219 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 LSM7Q9UK45 103 aaKnown RBP10.93□□□□□ -0.66
RPAIN-212ENST00000573126 SH3BP1Q9Y3L3 701 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 AGAP14A8MT82 685 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 PTGES3LE9PB15 166 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 PRAMEF4O60810 478 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 ABCB7O75027 752 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 ZNF682O95780 498 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 OLFM2O95897 454 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 UGT2B4P06133 528 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 RETP07949 1114 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 HTR1AP08908 422 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 SRCP12931 536 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 CLDN8P56748 225 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 NFATC3Q12968 1075 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 CBX2Q14781 532 aaPredicted RBP10.93□□□□□ -0.66
RPAIN-212ENST00000573126 SMU1Q2TAY7 513 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 C6orf141Q5SZD1 244 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 PRAMEF9Q5VWM5 478 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 OR4F3Q6IEY1 312 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 TPRG1Q6ZUI0 275 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 ZNF551Q7Z340 670 aaPredicted RBP10.93□□□□□ -0.66
RPAIN-212ENST00000573126 GALNT5Q7Z7M9 940 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 ADHFE1Q8IWW8 467 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 SPARTQ8N0X7 666 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 EID3Q8N140 333 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 CBARPQ8N350 705 aaPredicted RBP10.93□□□□□ -0.66
RPAIN-212ENST00000573126 TMEM132CQ8N3T6 1108 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 RNF217Q8TC41 542 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 SNRNP27Q8WVK2 155 aaKnown RBP10.93□□□□□ -0.66
RPAIN-212ENST00000573126 MYLIPQ8WY64 445 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 SLC29A3Q9BZD2 475 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 MRPL17Q9NRX2 175 aaKnown RBP10.93□□□□□ -0.66
RPAIN-212ENST00000573126 ASIC5Q9NY37 505 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 WARS2Q9UGM6 360 aaKnown RBP10.93□□□□□ -0.66
RPAIN-212ENST00000573126 TDRKHQ9Y2W6 561 aaKnown RBP10.93□□□□□ -0.66
RPAIN-212ENST00000573126 RFXANKO14593 260 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 PER2O15055 1255 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 ERN1O75460 977 aaKnown RBP10.93□□□□□ -0.66
RPAIN-212ENST00000573126 URODP06132 367 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 CCNA2P20248 432 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 PTPN6P29350 595 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 RAB33AQ14088 237 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 TBC1D25Q3MII6 688 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 ATG9BQ674R7 924 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 DOK6Q6PKX4 331 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 USP45Q70EL2 814 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 HS6ST3Q8IZP7 471 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 SVOPLQ8N434 492 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 PJA1Q8NG27 643 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 BARD1Q99728 777 aaKnown RBP10.93□□□□□ -0.66
RPAIN-212ENST00000573126 P2RY13Q9BPV8 354 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 TUBA1CQ9BQE3 449 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms