RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 HHEXQ03014 270 aa12.94□□□□□ -0.34
CCDC40-205ENST00000571028 ABRQ12979 859 aa12.94□□□□□ -0.34
CCDC40-205ENST00000571028 FRG1Q14331 258 aaKnown RBP12.94□□□□□ -0.34
CCDC40-205ENST00000571028 KIR2DS5Q14953 304 aa12.94□□□□□ -0.34
CCDC40-205ENST00000571028 SLMAPQ14BN4 828 aa12.94□□□□□ -0.34
CCDC40-205ENST00000571028 NKAIN2Q5VXU1 208 aa12.94□□□□□ -0.34
CCDC40-205ENST00000571028 TCTN3Q6NUS6 607 aa12.94□□□□□ -0.34
CCDC40-205ENST00000571028 ABRAXAS1Q6UWZ7 409 aa12.94□□□□□ -0.34
CCDC40-205ENST00000571028 KIAA0408Q6ZU52 694 aa12.94□□□□□ -0.34
CCDC40-205ENST00000571028 ZNF438Q7Z4V0 828 aa12.94□□□□□ -0.34
CCDC40-205ENST00000571028 VRK3Q8IV63 474 aa12.94□□□□□ -0.34
CCDC40-205ENST00000571028 CNTN4Q8IWV2 1026 aa12.94□□□□□ -0.34
CCDC40-205ENST00000571028 AHCYL2Q96HN2 611 aaKnown RBP12.94□□□□□ -0.34
CCDC40-205ENST00000571028 RMDN2Q96LZ7 410 aa12.94□□□□□ -0.34
CCDC40-205ENST00000571028 FERD3LQ96RJ6 166 aa12.94□□□□□ -0.34
CCDC40-205ENST00000571028 SLC38A3Q99624 504 aa12.94□□□□□ -0.34
CCDC40-205ENST00000571028 AARSD1Q9BTE6 412 aaKnown RBP12.94□□□□□ -0.34
CCDC40-205ENST00000571028 TRIT1Q9H3H1 467 aaKnown RBP12.94□□□□□ -0.34
CCDC40-205ENST00000571028 CUEDC1Q9NWM3 386 aaPredicted RBP12.94□□□□□ -0.34
CCDC40-205ENST00000571028 OCIAD1Q9NX40 245 aa12.94□□□□□ -0.34
CCDC40-205ENST00000571028 ZNF624Q9P2J8 865 aaPredicted RBP12.94□□□□□ -0.34
CCDC40-205ENST00000571028 CPNE7Q9UBL6 633 aa12.94□□□□□ -0.34
CCDC40-205ENST00000571028 LOC101059948A0A1B0GTJ6 334 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 SLC5A10A0PJK1 596 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 KLHL33A6NCF5 533 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 FAM159BA6NKW6 160 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 OR5K4A6NMS3 321 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 SPAG6O75602 509 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 GSTM1P09488 218 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 THRAP10827 490 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 AOAHP28039 575 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 GSTM4Q03013 218 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 ABHD18Q0P651 414 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 NR1D2Q14995 579 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 HECTD2Q5U5R9 776 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 AGAP9Q5VTM2 703 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 CEACAM20Q6UY09 585 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 SLC26A11Q86WA9 606 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 ZBTB2Q8N680 514 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 ACVR1CQ8NER5 493 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 CPT1CQ8TCG5 803 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 ASZ1Q8WWH4 475 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 PHF12Q96QT6 1004 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 GPR21Q99679 349 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 SLC30A3Q99726 388 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 CTRCQ99895 268 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 ZPBPQ9BS86 351 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 OR52A5Q9H2C5 316 aa12.93□□□□□ -0.34
CCDC40-205ENST00000571028 RUVBL2Q9Y230 463 aaKnown RBP12.93□□□□□ -0.34
CCDC40-205ENST00000571028 FAM95CA0A1B0GW59 222 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 POC1B-GALNT4F8VUJ3 575 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 KPNA5O15131 536 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 RFPL1O75677 317 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 MTHFD1P11586 935 aaKnown RBP12.92□□□□□ -0.34
CCDC40-205ENST00000571028 XRCC1P18887 633 aaPredicted RBP12.92□□□□□ -0.34
CCDC40-205ENST00000571028 MCM3P25205 808 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 ADARP55265 1226 aaKnown RBP12.92□□□□□ -0.34
CCDC40-205ENST00000571028 CDKN2DP55273 166 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 PRKG2Q13237 762 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 ZNF658BQ4V348 819 aaPredicted RBP12.92□□□□□ -0.34
CCDC40-205ENST00000571028 SDK2Q58EX2 2172 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 ACSBG2Q5FVE4 666 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 SNAP47Q5SQN1 464 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 ATP1A1-AS1Q5TC04 95 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 ZNF787Q6DD87 383 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 WASH2PQ6VEQ5 465 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 ZC3HC1Q86WB0 502 aaKnown RBP12.92□□□□□ -0.34
CCDC40-205ENST00000571028 RELL1Q8IUW5 271 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 UBLCP1Q8WVY7 318 aaPredicted RBP12.92□□□□□ -0.34
CCDC40-205ENST00000571028 TFGQ92734 400 aaPredicted RBP12.92□□□□□ -0.34
CCDC40-205ENST00000571028 HGH1Q9BTY7 390 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 TBC1D10AQ9BXI6 508 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 PARD6BQ9BYG5 372 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 WASH6PQ9NQA3 447 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 NSMCE4AQ9NXX6 385 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 CIDEBQ9UHD4 219 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 TRMT6Q9UJA5 497 aaKnown RBP12.92□□□□□ -0.34
CCDC40-205ENST00000571028 ASF1AQ9Y294 204 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 TDRKHQ9Y2W6 561 aaKnown RBP12.92□□□□□ -0.34
CCDC40-205ENST00000571028 MTO1Q9Y2Z2 717 aaKnown RBP12.92□□□□□ -0.34
CCDC40-205ENST00000571028 KCNMB2Q9Y691 235 aa12.92□□□□□ -0.34
CCDC40-205ENST00000571028 ANKRD17O75179 2603 aaKnown RBP12.91□□□□□ -0.34
CCDC40-205ENST00000571028 A0A087WUV0 522 aaPredicted RBP12.91□□□□□ -0.34
CCDC40-205ENST00000571028 IGHV1OR21-1A0A087WYE8 117 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 GPC4O75487 556 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 STK17BO94768 372 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 DDAH2O95865 285 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 TYRP1P17643 537 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 CSF2RBP32927 897 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 GP5P40197 560 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 CLCN7P51798 805 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 SLC12A2P55011 1212 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 RIPPLY3P57055 190 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 UBE2IP63279 158 aaKnown RBP12.91□□□□□ -0.34
CCDC40-205ENST00000571028 GPLD1P80108 840 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 RPA4Q13156 261 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 PDAP1Q13442 181 aaKnown RBP12.91□□□□□ -0.34
CCDC40-205ENST00000571028 GPR18Q14330 331 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 PLCL1Q15111 1095 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 TTLL9Q3SXZ7 439 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms