RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 VMACQ2NL98 169 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 SMTNL2Q2TAL5 461 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 ANKRD20A8PQ5CZ79 823 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 KCNT1Q5JUK3 1230 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 NUGGCQ68CJ6 796 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 PRSS55Q6UWB4 352 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-222ENST00000570139 DPY19L3Q6ZPD9 716 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 Q6ZRM9 215 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 CYP4V2Q6ZWL3 525 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-222ENST00000570139 SNX32Q86XE0 403 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 RFX6Q8HWS3 928 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 KLHL7Q8IXQ5 586 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 ELMOD1Q8N336 334 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 POMGNT2Q8NAT1 580 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 ATAD1Q8NBU5 361 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 DQX1Q8TE96 717 aaKnown RBP7.05□□□□□ -1.28
CNOT1-222ENST00000570139 HDAC7Q8WUI4 952 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 RAPGEF5Q92565 580 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 P3H4Q92791 437 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 PGLYRP2Q96PD5 576 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 RNF157Q96PX1 679 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 PEBP4Q96S96 227 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 RHOXF2Q9BQY4 288 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 ERP44Q9BS26 406 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 LRRC1Q9BTT6 524 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 PARD6BQ9BYG5 372 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 DCLK3Q9C098 648 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 DDX47Q9H0S4 455 aaKnown RBP7.05□□□□□ -1.28
CNOT1-222ENST00000570139 SFXN1Q9H9B4 322 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 ERVMER34-1Q9H9K5 563 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 PDE7BQ9NP56 450 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 GDF3Q9NR23 364 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 ARHGEF3Q9NR81 526 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 PIGVQ9NUD9 493 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 DDIT4Q9NX09 232 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 ARHGEF38Q9NXL2 777 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 PEMTQ9UBM1 199 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 SLC12A6Q9UHW9 1150 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 FBXW11Q9UKB1 542 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 YIPF1Q9Y548 306 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 V9GYY5 206 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-222ENST00000570139 LINC01553A4QN01 128 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 NPEPPSL1A6NEC2 478 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 TTC34A8MYJ7 566 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 HACD1B0YJ81 288 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 PI4K2BG5E9Z4 385 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 PRRG1O14668 218 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 RAD51CO43502 376 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 LIASO43766 372 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 CST8O60676 142 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 TCF4P15884 667 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 ATF6P18850 670 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 GSTM2P28161 218 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 HOXA9P31269 272 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 STIP1P31948 543 aaKnown RBP7.04□□□□□ -1.28
CNOT1-222ENST00000570139 ADRA1BP35368 520 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 VCPP55072 806 aaKnown RBP7.04□□□□□ -1.28
CNOT1-222ENST00000570139 RAE1P78406 368 aaKnown RBP7.04□□□□□ -1.28
CNOT1-222ENST00000570139 E2F1Q01094 437 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 GUCY2DQ02846 1103 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 ZNF33AQ06730 810 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 CALCOCO2Q13137 446 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 NME3Q13232 169 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 EIF4EBP2Q13542 120 aaPredicted RBP7.04□□□□□ -1.28
CNOT1-222ENST00000570139 PTK6Q13882 451 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 PPP1R7Q15435 360 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 KYNUQ16719 465 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 OTUD1Q5VV17 481 aaPredicted RBP7.04□□□□□ -1.28
CNOT1-222ENST00000570139 GARNL3Q5VVW2 1013 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 DAB2IPQ5VWQ8 1189 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 SYPL2Q5VXT5 272 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 CHST9Q7L1S5 443 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 SLC46A3Q7Z3Q1 461 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 TAC4Q86UU9 113 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 FAM131BQ86XD5 332 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 TICAM1Q8IUC6 712 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 CDKL3Q8IVW4 592 aaPredicted RBP7.04□□□□□ -1.28
CNOT1-222ENST00000570139 ARHGAP12Q8IWW6 846 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 PLD5Q8N7P1 536 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 ATP6V0D2Q8N8Y2 350 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 LEMD2Q8NC56 503 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 CADM4Q8NFZ8 388 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 RP9Q8TA86 221 aaKnown RBP7.04□□□□□ -1.28
CNOT1-222ENST00000570139 PSMG2Q969U7 264 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 B3GALT6Q96L58 329 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 C1orf74Q96LT6 269 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 CCDC114Q96M63 670 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 DHX35Q9H5Z1 703 aaKnown RBP7.04□□□□□ -1.28
CNOT1-222ENST00000570139 CYP4F11Q9HBI6 524 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 WDR6Q9NNW5 1121 aaKnown RBP7.04□□□□□ -1.28
CNOT1-222ENST00000570139 ENTPD7Q9NQZ7 604 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 GIMAP4Q9NUV9 329 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.04□□□□□ -1.28
CNOT1-222ENST00000570139 SMARCAL1Q9NZC9 954 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 EHD3Q9NZN3 535 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 MTRF1LQ9UGC7 380 aaKnown RBP7.04□□□□□ -1.28
CNOT1-222ENST00000570139 AMACRQ9UHK6 382 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 VPS4AQ9UN37 437 aa7.04□□□□□ -1.28
CNOT1-222ENST00000570139 HBS1LQ9Y450 684 aaKnown RBP7.04□□□□□ -1.28
CNOT1-222ENST00000570139 INSL5Q9Y5Q6 135 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms