RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 RPP25Q9BUL9 199 aaKnown RBP2.75□□□□□ -1.97
UBR1-209ENST00000569243 TRAF4Q9BUZ4 470 aaPredicted RBP2.75□□□□□ -1.97
UBR1-209ENST00000569243 MAK16Q9BXY0 300 aaKnown RBP2.75□□□□□ -1.97
UBR1-209ENST00000569243 MMP27Q9H306 513 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 DPAGT1Q9H3H5 408 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 OSGEPL1Q9H4B0 414 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 ZHX3Q9H4I2 956 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 NUDT4Q9NZJ9 180 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 MTUS1Q9ULD2 1270 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 PPP1R3CQ9UQK1 317 aa2.75□□□□□ -1.97
UBR1-209ENST00000569243 IGLV3-10A0A075B6K4 115 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 HYKKA2RU49 373 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 OR2A25A4D2G3 310 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 B4DLN1 442 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 ZBED4O75132 1171 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 CLDN1O95832 211 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 CYP2A7P20853 494 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 LEPRP48357 1165 aaKnown RBP2.74□□□□□ -1.97
UBR1-209ENST00000569243 MRPL12P52815 198 aaKnown RBP2.74□□□□□ -1.97
UBR1-209ENST00000569243 LIMK2P53671 638 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 PAX9P55771 341 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 TMF1P82094 1093 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 PAX8Q06710 450 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 COX10Q12887 443 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 CALCOCO2Q13137 446 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 Q6ZRP5 223 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 MAATS1Q7Z4T9 603 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 PTAR1Q7Z6K3 402 aaPredicted RBP2.74□□□□□ -1.97
UBR1-209ENST00000569243 CEP57Q86XR8 500 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 C17orf47Q8NEP4 570 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 OR13J1Q8NGT2 312 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 OR2AJ1Q8NGZ0 328 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 PHLDA1Q8WV24 401 aaPredicted RBP2.74□□□□□ -1.97
UBR1-209ENST00000569243 FAM120BQ96EK7 910 aaKnown RBP2.74□□□□□ -1.97
UBR1-209ENST00000569243 TIGD1Q96MW7 591 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 KIFC3Q9BVG8 833 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 A4GALTQ9NPC4 353 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 THEGQ9P2T0 379 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 MUTYHQ9UIF7 546 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 RIPK3Q9Y572 518 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 TRIM17Q9Y577 477 aa2.74□□□□□ -1.97
UBR1-209ENST00000569243 ITIH1P19827 911 aa2.73□□□□□ -1.97
UBR1-209ENST00000569243 TNFAIP3P21580 790 aa2.73□□□□□ -1.97
UBR1-209ENST00000569243 MMP12P39900 470 aa2.73□□□□□ -1.97
UBR1-209ENST00000569243 MAZP56270 477 aaKnown RBP2.73□□□□□ -1.97
UBR1-209ENST00000569243 MTHFSDQ2M296 383 aaKnown RBP2.73□□□□□ -1.97
UBR1-209ENST00000569243 COMMD2Q86X83 199 aa2.73□□□□□ -1.97
UBR1-209ENST00000569243 CEP57L1Q8IYX8 460 aa2.73□□□□□ -1.97
UBR1-209ENST00000569243 AFAP1Q8N556 730 aa2.73□□□□□ -1.97
UBR1-209ENST00000569243 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.73□□□□□ -1.97
UBR1-209ENST00000569243 OR52N5Q8NH56 324 aa2.73□□□□□ -1.97
UBR1-209ENST00000569243 EXD1Q8NHP7 514 aa2.73□□□□□ -1.97
UBR1-209ENST00000569243 ZNF519Q8TB69 540 aa2.73□□□□□ -1.97
UBR1-209ENST00000569243 PTPMT1Q8WUK0 201 aaPredicted RBP2.73□□□□□ -1.97
UBR1-209ENST00000569243 IRGQQ8WZA9 623 aa2.73□□□□□ -1.97
UBR1-209ENST00000569243 CYYR1Q96J86 154 aa2.73□□□□□ -1.97
UBR1-209ENST00000569243 DGCR6LQ9BY27 220 aa2.73□□□□□ -1.97
UBR1-209ENST00000569243 MRPL1Q9BYD6 325 aaKnown RBP2.73□□□□□ -1.97
UBR1-209ENST00000569243 FTOQ9C0B1 505 aaKnown RBP eCLIP2.73□□□□□ -1.97
UBR1-209ENST00000569243 ARHGEF38Q9NXL2 777 aa2.73□□□□□ -1.97
UBR1-209ENST00000569243 OR6C2Q9NZP2 312 aa2.73□□□□□ -1.97
UBR1-209ENST00000569243 ANKUB1A6NFN9 424 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 AP3D1O14617 1153 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 XRCC3O43542 346 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 AVILO75366 819 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 C22orf31O95567 290 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 IGKV3-15P01624 115 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 OR2T7P0C7T2 308 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 CAPN2P17655 700 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 TRIM21P19474 475 aaKnown RBP2.72□□□□□ -1.97
UBR1-209ENST00000569243 SLC9A3P48764 834 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 NAP1L1P55209 391 aaKnown RBP2.72□□□□□ -1.97
UBR1-209ENST00000569243 CREB5Q02930 508 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 MOGAT2Q3SYC2 334 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 HIGD2BQ4VC39 106 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 KLHL26Q53HC5 615 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 SLC25A47Q6Q0C1 308 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 FIGLAQ6QHK4 219 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 C4orf50Q6ZRC1 276 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 TMPRSS11FQ6ZWK6 438 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 SZRD1Q7Z422 152 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 POM121L12Q8N7R1 296 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.72□□□□□ -1.97
UBR1-209ENST00000569243 NPEPL1Q8NDH3 523 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 NUP37Q8NFH4 326 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 ZPLD1Q8TCW7 415 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 DHX58Q96C10 678 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 NSUN4Q96CB9 384 aaKnown RBP2.72□□□□□ -1.97
UBR1-209ENST00000569243 PRICKLE1Q96MT3 831 aaPredicted RBP2.72□□□□□ -1.97
UBR1-209ENST00000569243 NAP1L4Q99733 375 aaKnown RBP2.72□□□□□ -1.97
UBR1-209ENST00000569243 TEX12Q9BXU0 123 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 MED20Q9H944 212 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 OSER1Q9NX31 292 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 NDE1Q9NXR1 346 aa2.72□□□□□ -1.97
UBR1-209ENST00000569243 MYH14Q7Z406 1995 aaKnown RBP2.71□□□□□ -1.98
UBR1-209ENST00000569243 O00370 1275 aa2.71□□□□□ -1.98
UBR1-209ENST00000569243 GLRA3O75311 464 aa2.71□□□□□ -1.98
UBR1-209ENST00000569243 TSPAN9O75954 239 aa2.71□□□□□ -1.98
UBR1-209ENST00000569243 CDK2AP2O75956 126 aa2.71□□□□□ -1.98
UBR1-209ENST00000569243 GJA1P17302 382 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms