RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 PTPN4P29074 926 aa19.42■□□□□ 0.7
ABCA3-206ENST00000569062 PTGIRP43119 386 aa19.42■□□□□ 0.7
ABCA3-206ENST00000569062 THOC5Q13769 683 aaKnown RBP19.42■□□□□ 0.7
ABCA3-206ENST00000569062 GBX1Q14549 363 aa19.42■□□□□ 0.7
ABCA3-206ENST00000569062 CREG2Q8IUH2 290 aa19.42■□□□□ 0.7
ABCA3-206ENST00000569062 SPNS2Q8IVW8 549 aa19.42■□□□□ 0.7
ABCA3-206ENST00000569062 OR2L8Q8NGY9 312 aa19.42■□□□□ 0.7
ABCA3-206ENST00000569062 APOBEC4Q8WW27 367 aaKnown RBP19.42■□□□□ 0.7
ABCA3-206ENST00000569062 GPR87Q9BY21 358 aa19.42■□□□□ 0.7
ABCA3-206ENST00000569062 SLC25A18Q9H1K4 315 aa19.42■□□□□ 0.7
ABCA3-206ENST00000569062 FBXO6Q9NRD1 293 aaPredicted RBP19.42■□□□□ 0.7
ABCA3-206ENST00000569062 INTS10Q9NVR2 710 aaKnown RBP19.42■□□□□ 0.7
ABCA3-206ENST00000569062 ASIC3Q9UHC3 531 aa19.42■□□□□ 0.7
ABCA3-206ENST00000569062 SLC39A10Q9ULF5 831 aa19.42■□□□□ 0.7
ABCA3-206ENST00000569062 CTAGE9A4FU28 777 aa19.41■□□□□ 0.7
ABCA3-206ENST00000569062 MAGP20916 626 aa19.41■□□□□ 0.7
ABCA3-206ENST00000569062 RPS15P62841 145 aaKnown RBP19.41■□□□□ 0.7
ABCA3-206ENST00000569062 PTK6Q13882 451 aa19.41■□□□□ 0.7
ABCA3-206ENST00000569062 IZUMO3Q5VZ72 239 aa19.41■□□□□ 0.7
ABCA3-206ENST00000569062 PAPD7Q5XG87 772 aaKnown RBP19.41■□□□□ 0.7
ABCA3-206ENST00000569062 TTC23LQ6PF05 361 aa19.41■□□□□ 0.7
ABCA3-206ENST00000569062 ZBTB2Q8N680 514 aa19.41■□□□□ 0.7
ABCA3-206ENST00000569062 N4BP2L2Q92802 583 aaPredicted RBP19.41■□□□□ 0.7
ABCA3-206ENST00000569062 SLCO2A1Q92959 643 aa19.41■□□□□ 0.7
ABCA3-206ENST00000569062 RAD51AP1Q96B01 352 aa19.41■□□□□ 0.7
ABCA3-206ENST00000569062 SLC30A3Q99726 388 aa19.41■□□□□ 0.7
ABCA3-206ENST00000569062 SLC7A5P2Q9GIP4 190 aa19.41■□□□□ 0.7
ABCA3-206ENST00000569062 CHRNA10Q9GZZ6 450 aa19.41■□□□□ 0.7
ABCA3-206ENST00000569062 SPRTNQ9H040 489 aaPredicted RBP19.41■□□□□ 0.7
ABCA3-206ENST00000569062 C20orf96Q9NUD7 363 aaPredicted RBP19.41■□□□□ 0.7
ABCA3-206ENST00000569062 PCYOX1Q9UHG3 505 aa19.41■□□□□ 0.7
ABCA3-206ENST00000569062 FARSAQ9Y285 508 aaKnown RBP19.41■□□□□ 0.7
ABCA3-206ENST00000569062 KCNMB2Q9Y691 235 aa19.41■□□□□ 0.7
ABCA3-206ENST00000569062 E5RI56 91 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 BANF1O75531 89 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 OR2B3O76000 313 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 MATN4O95460 622 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 RECKO95980 971 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 SLC1A2P43004 574 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 LONRF1Q17RB8 773 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 PTCHD3Q3KNS1 767 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 ACSBG2Q5FVE4 666 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 KLHL7Q8IXQ5 586 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 SYTL1Q8IYJ3 562 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 GPR135Q8IZ08 494 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 DNAJC22Q8N4W6 341 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 DENND1AQ8TEH3 1009 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 FOPNLQ96NB1 174 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 FAM117AQ9C073 453 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 TUBD1Q9UJT1 453 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 POLHQ9Y253 713 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 VPS9D1Q9Y2B5 631 aa19.4■□□□□ 0.7
ABCA3-206ENST00000569062 PRICKLE3O43900 615 aaPredicted RBP19.39■□□□□ 0.69
ABCA3-206ENST00000569062 CAPN1P07384 714 aa19.39■□□□□ 0.69
ABCA3-206ENST00000569062 IVDP26440 423 aa19.39■□□□□ 0.69
ABCA3-206ENST00000569062 ATP5DP30049 168 aa19.39■□□□□ 0.69
ABCA3-206ENST00000569062 CLCN7P51798 805 aa19.39■□□□□ 0.69
ABCA3-206ENST00000569062 DHX9Q08211 1270 aaKnown RBP19.39■□□□□ 0.69
ABCA3-206ENST00000569062 IL10RAQ13651 578 aa19.39■□□□□ 0.69
ABCA3-206ENST00000569062 KLHL38Q2WGJ6 581 aa19.39■□□□□ 0.69
ABCA3-206ENST00000569062 MSS51Q4VC12 460 aa19.39■□□□□ 0.69
ABCA3-206ENST00000569062 FAM69BQ5VUD6 431 aa19.39■□□□□ 0.69
ABCA3-206ENST00000569062 ZNF385CQ66K41 422 aaPredicted RBP19.39■□□□□ 0.69
ABCA3-206ENST00000569062 ZNF549Q6P9A3 640 aa19.39■□□□□ 0.69
ABCA3-206ENST00000569062 FAM198BQ6UWH4 519 aa19.39■□□□□ 0.69
ABCA3-206ENST00000569062 SYVN1Q86TM6 617 aa19.39■□□□□ 0.69
ABCA3-206ENST00000569062 ENDOVQ8N8Q3 282 aaKnown RBP19.39■□□□□ 0.69
ABCA3-206ENST00000569062 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.39■□□□□ 0.69
ABCA3-206ENST00000569062 SLC22A18Q96BI1 424 aa19.39■□□□□ 0.69
ABCA3-206ENST00000569062 NAPGQ99747 312 aaPredicted RBP19.39■□□□□ 0.69
ABCA3-206ENST00000569062 RAB11FIP5Q9BXF6 653 aa19.39■□□□□ 0.69
ABCA3-206ENST00000569062 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.39■□□□□ 0.69
ABCA3-206ENST00000569062 MED16Q9Y2X0 877 aa19.39■□□□□ 0.69
ABCA3-206ENST00000569062 SAR1BQ9Y6B6 198 aa19.39■□□□□ 0.69
ABCA3-206ENST00000569062 FAM169AQ9Y6X4 670 aa19.39■□□□□ 0.69
ABCA3-206ENST00000569062 CCDC88CQ9P219 2028 aa19.39■□□□□ 0.69
ABCA3-206ENST00000569062 TLN1Q9Y490 2541 aaKnown RBP19.39■□□□□ 0.69
ABCA3-206ENST00000569062 FANCGO15287 622 aa19.38■□□□□ 0.69
ABCA3-206ENST00000569062 SLC28A2O43868 658 aa19.38■□□□□ 0.69
ABCA3-206ENST00000569062 HAUS5O94927 633 aa19.38■□□□□ 0.69
ABCA3-206ENST00000569062 PSMB5P28074 263 aa19.38■□□□□ 0.69
ABCA3-206ENST00000569062 CCNFP41002 786 aa19.38■□□□□ 0.69
ABCA3-206ENST00000569062 MPP1Q00013 466 aa19.38■□□□□ 0.69
ABCA3-206ENST00000569062 PCM1Q15154 2024 aa19.38■□□□□ 0.69
ABCA3-206ENST00000569062 SF1Q15637 639 aaKnown RBP19.38■□□□□ 0.69
ABCA3-206ENST00000569062 UGT8Q16880 541 aa19.38■□□□□ 0.69
ABCA3-206ENST00000569062 HSP90AA5PQ58FG0 334 aa19.38■□□□□ 0.69
ABCA3-206ENST00000569062 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.38■□□□□ 0.69
ABCA3-206ENST00000569062 FCRL6Q6DN72 434 aa19.38■□□□□ 0.69
ABCA3-206ENST00000569062 PRICKLE2Q7Z3G6 844 aa19.38■□□□□ 0.69
ABCA3-206ENST00000569062 PCGF5Q86SE9 256 aa19.38■□□□□ 0.69
ABCA3-206ENST00000569062 GIMAP7Q8NHV1 300 aa19.38■□□□□ 0.69
ABCA3-206ENST00000569062 ABHD17AQ96GS6 310 aa19.38■□□□□ 0.69
ABCA3-206ENST00000569062 NLNQ9BYT8 704 aa19.38■□□□□ 0.69
ABCA3-206ENST00000569062 ZNF71Q9NQZ8 489 aaPredicted RBP19.38■□□□□ 0.69
ABCA3-206ENST00000569062 IARS2Q9NSE4 1012 aaKnown RBP19.38■□□□□ 0.69
ABCA3-206ENST00000569062 PLCL2Q9UPR0 1127 aa19.38■□□□□ 0.69
ABCA3-206ENST00000569062 HEMK1Q9Y5R4 338 aaPredicted RBP19.38■□□□□ 0.69
ABCA3-206ENST00000569062 MRFAP1Q9Y605 127 aa19.38■□□□□ 0.69
ABCA3-206ENST00000569062 HELZ2Q9BYK8 2649 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms