RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 ARHGAP15Q53QZ3 475 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 OR4F3Q6IEY1 312 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 PCED1BQ96HM7 432 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 DUSP26Q9BV47 211 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 TNKS2Q9H2K2 1166 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 SLC35C2Q9NQQ7 365 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 MAT2BQ9NZL9 334 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 CLCA3PQ9Y6N3 262 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 FAM208AQ9UK61 1670 aaKnown RBP12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 TTC24A2A3L6 582 aaPredicted RBP12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 MSCO60682 206 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 KERAO60938 352 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 ESR1P03372 595 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 PROZP22891 400 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 HTR2BP41595 481 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 CBLBQ13191 982 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 GRB7Q14451 532 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 KLHL22Q53GT1 634 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 MARCH9Q86YJ5 346 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 OR7D4Q8NG98 312 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 DNAJB8Q8NHS0 232 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 ASB12Q8WXK4 309 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 KLHL6Q8WZ60 621 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 NPLQ9BXD5 320 aaPredicted RBP12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 AFDNP55196 1824 aaKnown RBP12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 PTPRJQ12913 1337 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 ARVCFO00192 962 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 STX16O14662 325 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 PLD2O14939 933 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 DNAJB5O75953 348 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 ECDO95905 644 aaPredicted RBP12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 FGBP02675 491 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 MAPK8P45983 427 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 YBEYP58557 167 aaPredicted RBP12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 POMGNT2Q8NAT1 580 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 FAM98AQ8NCA5 519 aaKnown RBP12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 PJA1Q8NG27 643 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 VMP1Q96GC9 406 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 MYO19Q96H55 970 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 MTERF1Q99551 399 aaKnown RBP12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 ASPNQ9BXN1 380 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 SEZ6LQ9BYH1 1024 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 EQTNQ9NQ60 294 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 ERVK13-1Q9NX77 482 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 FFAR2O15552 330 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 TSPAN1O60635 241 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 BCAS1O75363 584 aaPredicted RBP12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 RPN2P04844 631 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 OR4Q2P0C623 313 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 IL7P13232 177 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 CPN2P22792 545 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 RPL10P27635 214 aaKnown RBP12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 GUCA1AP43080 201 aaPredicted RBP12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 AP3S2P59780 193 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 TBC1D25Q3MII6 688 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 ZNF678Q5SXM1 525 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 C1orf220Q5T0J3 134 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 RFKQ969G6 155 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 MED11Q9P086 117 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 PLOD2O00469 737 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 NUDT14O95848 222 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 BMP2P12643 396 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 LILRA4P59901 499 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 SLC25A24Q6NUK1 477 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 LINGO4Q6UY18 593 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 SERPINA9Q86WD7 417 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 TIGD4Q8IY51 512 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 DSN1Q9H410 356 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 POFUT2Q9Y2G5 429 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 POLR1DQ9Y2S0 133 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 BHMG1C9JSJ3 638 aaPredicted RBP12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 INMT-MINDY4F8WBC2 141 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 TLR4O00206 839 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 ATE1O95260 518 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 GSTM2P28161 218 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 ZNF81P51508 661 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 DNAJB13P59910 316 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 RPA4Q13156 261 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 FAM91A1Q658Y4 838 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 HMBOX1Q6NT76 420 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 CACUL1Q86Y37 369 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 SLITRK4Q8IW52 837 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 ZNF486Q96H40 463 aaPredicted RBP12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 CCDC115Q96NT0 180 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 CCDC3Q9BQI4 270 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 MFSD1Q9H3U5 465 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 ELAC1Q9H777 363 aaKnown RBP12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 FAM118AQ9NWS6 357 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 SPEF2Q9C093 1822 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 MRC1P22897 1456 aa12.14□□□□□ -0.47
CSPG4P13-202ENST00000567704 ISM1B1AKI9 464 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 BTBD19C9JJ37 291 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 DLGAP1O14490 977 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 REM1O75628 298 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 PIGRP01833 764 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 SAGP10523 405 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 ACSL1P33121 698 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 CDH5P33151 784 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 PTGER3P43115 390 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 PLA2G16P53816 162 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms