RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 LRTM1Q9HBL6 345 aa17.31■□□□□ 0.36
CMTM3-214ENST00000567572 MANBAO00462 879 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 ERN1O75460 977 aaKnown RBP17.3■□□□□ 0.36
CMTM3-214ENST00000567572 STK16O75716 305 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 TRIM16O95361 564 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 CYP17A1P05093 508 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 RETP07949 1114 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 ANXA5P08758 320 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 PRPH2P23942 346 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 NRIP1P48552 1158 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 CYP4F3Q08477 520 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 MYBPC3Q14896 1274 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 PHKG1Q16816 387 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 IMPG1Q17R60 797 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 C18orf21Q32NC0 220 aaPredicted RBP17.3■□□□□ 0.36
CMTM3-214ENST00000567572 ATG9BQ674R7 924 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 CRTC1Q6UUV9 634 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 TPRG1Q6ZUI0 275 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 CHST14Q8NCH0 376 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 VN1R2Q8NFZ6 395 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 TMIGD2Q96BF3 282 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 AURKBQ96GD4 344 aaPredicted RBP17.3■□□□□ 0.36
CMTM3-214ENST00000567572 FBXL20Q96IG2 436 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 CERS4Q9HA82 394 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 NTN4Q9HB63 628 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 C1orf109Q9NX04 203 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 ZDHHC3Q9NYG2 299 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 USE1Q9NZ43 259 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 TMEM9Q9P0T7 183 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 DNAJB9Q9UBS3 223 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 PCDHGA11Q9Y5H2 935 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 PRSS21Q9Y6M0 314 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 PDE4DIPQ5VU43 2346 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 CDH23Q9H251 3354 aa17.3■□□□□ 0.36
CMTM3-214ENST00000567572 UPK1AO00322 258 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 GUCA1CO95843 209 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 ALPLP05186 524 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 UGT2B4P06133 528 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 CDK4P11802 303 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 POLR2EP19388 210 aaKnown RBP17.29■□□□□ 0.36
CMTM3-214ENST00000567572 PBX2P40425 430 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 DGKQP52824 942 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 CDH15P55291 814 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 HPCAP84074 193 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 KCNC3Q14003 757 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 MSANTD1Q6ZTZ1 278 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 USP45Q70EL2 814 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 GPR180Q86V85 440 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 FRS2Q8WU20 508 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 MYLIPQ8WY64 445 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 ISOC1Q96CN7 298 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 APOL5Q9BWW9 433 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 NPLQ9BXD5 320 aaPredicted RBP17.29■□□□□ 0.36
CMTM3-214ENST00000567572 SFXN1Q9H9B4 322 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 ZNF490Q9ULM2 529 aaPredicted RBP17.29■□□□□ 0.36
CMTM3-214ENST00000567572 MAN2B2Q9Y2E5 1009 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 C2orf16Q68DN1 1984 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 A0A1W2PQ67 120 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 KLHL33A6NCF5 533 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 FAM220BPB1ANY3 271 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 GSTA4O15217 222 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 HOXC11O43248 304 aaPredicted RBP17.29■□□□□ 0.36
CMTM3-214ENST00000567572 RSL1D1O76021 490 aaKnown RBP17.29■□□□□ 0.36
CMTM3-214ENST00000567572 CLDN9O95484 217 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 PGRP06401 933 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 PRPS2P11908 318 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 CA5AP35218 305 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 SP140Q13342 867 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 SELPLGQ14242 412 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 CHRNA6Q15825 494 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 FAM174BQ3ZCQ3 159 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 LRRC23Q53EV4 343 aaPredicted RBP17.29■□□□□ 0.36
CMTM3-214ENST00000567572 HABP4Q5JVS0 413 aaKnown RBP17.29■□□□□ 0.36
CMTM3-214ENST00000567572 RALGPS2Q86X27 583 aaPredicted RBP17.29■□□□□ 0.36
CMTM3-214ENST00000567572 NPAS3Q8IXF0 933 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 GAB3Q8WWW8 586 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 VAPAQ9P0L0 249 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 KLQ9UEF7 1012 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 TMED5Q9Y3A6 229 aa17.29■□□□□ 0.36
CMTM3-214ENST00000567572 RANBP2P49792 3224 aaKnown RBP17.29■□□□□ 0.36
CMTM3-214ENST00000567572 IGLV3-16A0A075B6K0 115 aa17.28■□□□□ 0.36
CMTM3-214ENST00000567572 TRBV5-3A0A0A0MS03 114 aa17.28■□□□□ 0.36
CMTM3-214ENST00000567572 ELOVL7A1L3X0 281 aa17.28■□□□□ 0.36
CMTM3-214ENST00000567572 SERTM1A2A2V5 107 aa17.28■□□□□ 0.36
CMTM3-214ENST00000567572 SNAP29O95721 258 aa17.28■□□□□ 0.36
CMTM3-214ENST00000567572 CPNE6O95741 557 aa17.28■□□□□ 0.36
CMTM3-214ENST00000567572 C8GP07360 202 aa17.28■□□□□ 0.36
CMTM3-214ENST00000567572 CISD3P0C7P0 127 aa17.28■□□□□ 0.36
CMTM3-214ENST00000567572 THRBP10828 461 aa17.28■□□□□ 0.36
CMTM3-214ENST00000567572 ADH5P11766 374 aa17.28■□□□□ 0.36
CMTM3-214ENST00000567572 LHCGRP22888 699 aa17.28■□□□□ 0.36
CMTM3-214ENST00000567572 NFKBIAP25963 317 aa17.28■□□□□ 0.36
CMTM3-214ENST00000567572 DCKP27707 260 aa17.28■□□□□ 0.36
CMTM3-214ENST00000567572 MAPK1P28482 360 aa17.28■□□□□ 0.36
CMTM3-214ENST00000567572 VIPR2P41587 438 aa17.28■□□□□ 0.36
CMTM3-214ENST00000567572 MAGEA10P43363 369 aaPredicted RBP17.28■□□□□ 0.36
CMTM3-214ENST00000567572 HNMTP50135 292 aa17.28■□□□□ 0.36
CMTM3-214ENST00000567572 VASPP50552 380 aaPredicted RBP17.28■□□□□ 0.36
CMTM3-214ENST00000567572 ZNF33BQ06732 778 aa17.28■□□□□ 0.36
CMTM3-214ENST00000567572 RUNDC3AQ59EK9 446 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms