RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 TRIM73Q86UV7 250 aa20.91■□□□□ 0.94
NME3-210ENST00000567271 ZC3HC1Q86WB0 502 aaKnown RBP20.91■□□□□ 0.94
NME3-210ENST00000567271 RASGRP3Q8IV61 690 aa20.91■□□□□ 0.94
NME3-210ENST00000567271 RAB42Q8N4Z0 105 aa20.91■□□□□ 0.94
NME3-210ENST00000567271 C2orf73Q8N5S3 287 aaPredicted RBP20.91■□□□□ 0.94
NME3-210ENST00000567271 FAM45AQ8TCE6 357 aa20.91■□□□□ 0.94
NME3-210ENST00000567271 DENND1AQ8TEH3 1009 aa20.91■□□□□ 0.94
NME3-210ENST00000567271 EEF1AKMT1Q8WVE0 214 aa20.91■□□□□ 0.94
NME3-210ENST00000567271 MCMBPQ9BTE3 642 aa20.91■□□□□ 0.94
NME3-210ENST00000567271 FAM129AQ9BZQ8 928 aa20.91■□□□□ 0.94
NME3-210ENST00000567271 LRRC4CQ9HCJ2 640 aa20.91■□□□□ 0.94
NME3-210ENST00000567271 SOHLH2Q9NX45 425 aa20.91■□□□□ 0.94
NME3-210ENST00000567271 SPATA7Q9P0W8 599 aa20.91■□□□□ 0.94
NME3-210ENST00000567271 ADAMTS20P59510 1910 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 FAM159BA6NKW6 160 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 CXorf49A8MYA2 514 aaPredicted RBP20.9■□□□□ 0.94
NME3-210ENST00000567271 ISM1B1AKI9 464 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 GFYI3L273 518 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 MYO1CO00159 1063 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 PIAS1O75925 651 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 C1QAP02745 245 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 PVRP15151 417 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 FDXRP22570 491 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 TUBB4BP68371 445 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 TUBB3Q13509 450 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 SLC5A12Q1EHB4 618 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 LRRC8EQ6NSJ5 796 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 C19orf48Q6RUI8 117 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 BPHLQ86WA6 291 aaPredicted RBP20.9■□□□□ 0.94
NME3-210ENST00000567271 PPP1R3BQ86XI6 285 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 FBXO15Q8NCQ5 510 aaPredicted RBP20.9■□□□□ 0.94
NME3-210ENST00000567271 OR9A1PQ8NGU1 263 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 HMGCLL1Q8TB92 370 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 CDKL2Q92772 493 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 SLC22A18Q96BI1 424 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 ELMO2Q96JJ3 720 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 PDE7BQ9NP56 450 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 FGF21Q9NSA1 209 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 PILRAQ9UKJ1 303 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 SDK2Q58EX2 2172 aa20.9■□□□□ 0.94
NME3-210ENST00000567271 A0A0J9YY10 115 aa20.89■□□□□ 0.93
NME3-210ENST00000567271 RGS4P49798 205 aa20.89■□□□□ 0.93
NME3-210ENST00000567271 PDAP1Q13442 181 aaKnown RBP20.89■□□□□ 0.93
NME3-210ENST00000567271 CYP2A13Q16696 494 aa20.89■□□□□ 0.93
NME3-210ENST00000567271 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.89■□□□□ 0.93
NME3-210ENST00000567271 IFT81Q8WYA0 676 aa20.89■□□□□ 0.93
NME3-210ENST00000567271 ZNF501Q96CX3 271 aaPredicted RBP20.89■□□□□ 0.93
NME3-210ENST00000567271 OLFM1Q99784 485 aa20.89■□□□□ 0.93
NME3-210ENST00000567271 KLHL25Q9H0H3 589 aa20.89■□□□□ 0.93
NME3-210ENST00000567271 LNPEPQ9UIQ6 1025 aa20.89■□□□□ 0.93
NME3-210ENST00000567271 RARRES3Q9UL19 164 aa20.89■□□□□ 0.93
NME3-210ENST00000567271 TMEM184BQ9Y519 407 aaPredicted RBP20.89■□□□□ 0.93
NME3-210ENST00000567271 CFAP47Q6ZTR5 3102 aa20.89■□□□□ 0.93
NME3-210ENST00000567271 MAP3K7O43318 606 aa20.88■□□□□ 0.93
NME3-210ENST00000567271 ZBTB14O43829 449 aa20.88■□□□□ 0.93
NME3-210ENST00000567271 PRICKLE3O43900 615 aaPredicted RBP20.88■□□□□ 0.93
NME3-210ENST00000567271 SPAG6O75602 509 aa20.88■□□□□ 0.93
NME3-210ENST00000567271 STK17BO94768 372 aa20.88■□□□□ 0.93
NME3-210ENST00000567271 PGGT1BP53609 377 aa20.88■□□□□ 0.93
NME3-210ENST00000567271 ILF2Q12905 390 aaKnown RBP20.88■□□□□ 0.93
NME3-210ENST00000567271 GPR19Q15760 415 aa20.88■□□□□ 0.93
NME3-210ENST00000567271 BROXQ5VW32 411 aa20.88■□□□□ 0.93
NME3-210ENST00000567271 TAX1BP1Q86VP1 789 aa20.88■□□□□ 0.93
NME3-210ENST00000567271 NKD1Q969G9 470 aa20.88■□□□□ 0.93
NME3-210ENST00000567271 PKP4Q99569 1192 aa20.88■□□□□ 0.93
NME3-210ENST00000567271 RHOJQ9H4E5 214 aa20.88■□□□□ 0.93
NME3-210ENST00000567271 MTRF1LQ9UGC7 380 aaKnown RBP20.88■□□□□ 0.93
NME3-210ENST00000567271 FAM95CA0A1B0GW59 222 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 TSPAN12O95859 305 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 DLGAP3O95886 979 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 MSL3P1P0C860 447 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 ERGP11308 486 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 ZNF28P17035 718 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 MAP4P27816 1152 aaKnown RBP20.87■□□□□ 0.93
NME3-210ENST00000567271 ECHS1P30084 290 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 IL2P60568 153 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 ZIC1Q15915 447 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 COL28A1Q2UY09 1125 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 CEP128Q6ZU80 1094 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 UBE2R2Q712K3 238 aaPredicted RBP20.87■□□□□ 0.93
NME3-210ENST00000567271 TIPARPQ7Z3E1 657 aaKnown RBP20.87■□□□□ 0.93
NME3-210ENST00000567271 RELL1Q8IUW5 271 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 MYO1HQ8N1T3 1032 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 C19orf47Q8N9M1 422 aaKnown RBP20.87■□□□□ 0.93
NME3-210ENST00000567271 OR8K5Q8NH50 307 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 FBF1Q8TES7 1133 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 LINGO1Q96FE5 620 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 TCTN2Q96GX1 697 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 FCRL4Q96PJ5 515 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 CPNE1Q99829 537 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 ULBP3Q9BZM4 244 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 CHRNA10Q9GZZ6 450 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 TSPYL1Q9H0U9 437 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 SYTL2Q9HCH5 934 aa20.87■□□□□ 0.93
NME3-210ENST00000567271 A0A1W2PPV9 198 aa20.86■□□□□ 0.93
NME3-210ENST00000567271 RAD1O60671 282 aa20.86■□□□□ 0.93
NME3-210ENST00000567271 TIAF1O95411 115 aa20.86■□□□□ 0.93
NME3-210ENST00000567271 SAT1P21673 171 aa20.86■□□□□ 0.93
NME3-210ENST00000567271 OAS2P29728 719 aaKnown RBP20.86■□□□□ 0.93
NME3-210ENST00000567271 STX2P32856 288 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms