RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 PIM1P11309 404 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-216ENST00000567071 TCP1P17987 556 aaKnown RBP9.32□□□□□ -0.92
CAPN3-216ENST00000567071 HSPA9P38646 679 aaKnown RBP9.32□□□□□ -0.92
CAPN3-216ENST00000567071 PAPOLAP51003 745 aaKnown RBP9.32□□□□□ -0.92
CAPN3-216ENST00000567071 KPNA2P52292 529 aaKnown RBP9.32□□□□□ -0.92
CAPN3-216ENST00000567071 STC1P52823 247 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 CDH6P55285 790 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 PTSQ03393 145 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 CBLBQ13191 982 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 ERMARDQ5T6L9 678 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 SEL1L2Q5TEA6 688 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 LRRC38Q5VT99 294 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 FBXO38Q6PIJ6 1188 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 KIRREL2Q6UWL6 708 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 MFSD7Q6UXD7 560 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 PYROXD2Q8N2H3 581 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 BBS5Q8N3I7 341 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 NTAN1Q96AB6 310 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 MS4A14Q96JA4 679 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 PSKH2Q96QS6 385 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 KCTD15Q96SI1 283 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-216ENST00000567071 MENTQ9BUN1 341 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 BEX4Q9NWD9 120 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-216ENST00000567071 IRAK4Q9NWZ3 460 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 DDX56Q9NY93 547 aaKnown RBP9.32□□□□□ -0.92
CAPN3-216ENST00000567071 SLC23A2Q9UGH3 650 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 CNOT6Q9ULM6 557 aaKnown RBP9.32□□□□□ -0.92
CAPN3-216ENST00000567071 FZD10Q9ULW2 581 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 HS3ST3B1Q9Y662 390 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 NPIPA5E9PKD4 350 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 CNOT3O75175 753 aaKnown RBP9.31□□□□□ -0.92
CAPN3-216ENST00000567071 OR2B3O76000 313 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 WFS1O76024 890 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 PGLSO95336 258 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 HPP00738 406 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 BMP7P18075 431 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 KDELR1P24390 212 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 SOX11P35716 441 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 PEX19P40855 299 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 LMAN1P49257 510 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 FOXL2P58012 376 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 DCAF7P61962 342 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 OLIG2Q13516 323 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 BOLA3Q53S33 107 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 HOOK3Q86VS8 718 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 KCTD6Q8NC69 237 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 OR11G2Q8NGC1 345 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 GPR150Q8NGU9 434 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 FKBP10Q96AY3 582 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 RBM41Q96IZ5 413 aaKnown RBP9.31□□□□□ -0.92
CAPN3-216ENST00000567071 CELF6Q96J87 481 aaKnown RBP9.31□□□□□ -0.92
CAPN3-216ENST00000567071 PBKQ96KB5 322 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 NUDCD1Q96RS6 583 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 SARGQ9BW04 601 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 HEMGNQ9BXL5 484 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 TSPAN10Q9H1Z9 355 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-216ENST00000567071 FAM83DQ9H4H8 585 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 LRRC19Q9H756 370 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 ZNF160Q9HCG1 818 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 PCDH18Q9HCL0 1135 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 TRIM39Q9HCM9 518 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 PKD2L2Q9NZM6 624 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 NXT1Q9UKK6 140 aaKnown RBP9.31□□□□□ -0.92
CAPN3-216ENST00000567071 NPIPA1Q9UND3 350 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 RNF6Q9Y252 685 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 PPIL1Q9Y3C6 166 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 L3MBTL1Q9Y468 752 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 MRFAP1Q9Y605 127 aa9.31□□□□□ -0.92
CAPN3-216ENST00000567071 OR5H15A6NDH6 313 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 C3orf70A6NLC5 250 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-216ENST00000567071 FADS2P1A8MWK0 482 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 ADAM10O14672 748 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 MAP2K7O14733 419 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 CHUKO15111 745 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 ASNA1O43681 348 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 WDPCPO95876 746 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 FGGP02679 453 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 TPOP07202 933 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 POLR2CP19387 275 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-216ENST00000567071 HLA-DPA1P20036 260 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 CDKN2BP42772 138 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 KIR2DL3P43628 341 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 ARSEP51690 589 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 AIF1P55008 147 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 AP2B1P63010 937 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 DYNLT1P63172 113 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 IL10RBQ08334 325 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 TRAF2Q12933 501 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 XRCC4Q13426 336 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 DPYSL3Q14195 570 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 LBRQ14739 615 aaKnown RBP9.3□□□□□ -0.92
CAPN3-216ENST00000567071 PTPRRQ15256 657 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 RPE65Q16518 533 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 DPYSL2Q16555 572 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 ZNF766Q5HY98 468 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 RALGPS1Q5JS13 557 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 Q5PR19 223 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 HENMT1Q5T8I9 393 aaKnown RBP9.3□□□□□ -0.92
CAPN3-216ENST00000567071 CCDC181Q5TID7 509 aa9.3□□□□□ -0.92
CAPN3-216ENST00000567071 ABHD17BQ5VST6 288 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms