RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 ZUFSPQ96AP4 578 aa14.42□□□□□ -0.1
RNF40-209ENST00000566703 FKBP10Q96AY3 582 aa14.42□□□□□ -0.1
RNF40-209ENST00000566703 MENTQ9BUN1 341 aa14.42□□□□□ -0.1
RNF40-209ENST00000566703 RBSNQ9H1K0 784 aa14.42□□□□□ -0.1
RNF40-209ENST00000566703 ZNF552Q9H707 407 aaPredicted RBP14.42□□□□□ -0.1
RNF40-209ENST00000566703 IRAK4Q9NWZ3 460 aa14.42□□□□□ -0.1
RNF40-209ENST00000566703 IL1RAPL1Q9NZN1 696 aa14.42□□□□□ -0.1
RNF40-209ENST00000566703 PLEKHB1Q9UF11 243 aaPredicted RBP14.42□□□□□ -0.1
RNF40-209ENST00000566703 SLC2A6Q9UGQ3 507 aa14.42□□□□□ -0.1
RNF40-209ENST00000566703 ANAPC5Q9UJX4 755 aa14.42□□□□□ -0.1
RNF40-209ENST00000566703 ZNF148Q9UQR1 794 aa14.42□□□□□ -0.1
RNF40-209ENST00000566703 B3GNT3Q9Y2A9 372 aa14.42□□□□□ -0.1
RNF40-209ENST00000566703 TCAF1Q9Y4C2 921 aa14.42□□□□□ -0.1
RNF40-209ENST00000566703 MRFAP1Q9Y605 127 aa14.42□□□□□ -0.1
RNF40-209ENST00000566703 TARM1B6A8C7 271 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 AP3B1O00203 1094 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 PRMT5O14744 637 aaPredicted RBP14.41□□□□□ -0.1
RNF40-209ENST00000566703 KPNA5O15131 536 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 CNOT3O75175 753 aaKnown RBP14.41□□□□□ -0.1
RNF40-209ENST00000566703 IFNB1P01574 187 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 ALAS2P22557 587 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 AOAHP28039 575 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 TTPAP49638 278 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 TCTE1Q5JU00 501 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 PCID2Q5JVF3 399 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 SEL1L2Q5TEA6 688 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 TTC23LQ6PF05 361 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 PPP1R32Q7Z5V6 425 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 SLC13A5Q86YT5 568 aaPredicted RBP14.41□□□□□ -0.1
RNF40-209ENST00000566703 LINC01555Q8NAE3 123 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 OR2L8Q8NGY9 312 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 ATG4AQ8WYN0 398 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 ZNF778Q96MU6 729 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 PANX3Q96QZ0 392 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 RAB11FIP5Q9BXF6 653 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 WDR54Q9H977 334 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 RAB6BQ9NRW1 208 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 SLC22A11Q9NSA0 550 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.41□□□□□ -0.1
RNF40-209ENST00000566703 PAK5Q9P286 719 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 PLAGL1Q9UM63 463 aa14.41□□□□□ -0.1
RNF40-209ENST00000566703 PIKFYVEQ9Y2I7 2098 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 AGPSO00116 658 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 PRICKLE3O43900 615 aaPredicted RBP14.4□□□□□ -0.1
RNF40-209ENST00000566703 SRPX2O60687 465 aaPredicted RBP14.4□□□□□ -0.1
RNF40-209ENST00000566703 SEMA7AO75326 666 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 CTSBP07858 339 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 UMODP07911 640 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 MAGP20916 626 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 MMP11P24347 488 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 GRIA1P42261 906 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 AIMP2Q13155 320 aaKnown RBP14.4□□□□□ -0.1
RNF40-209ENST00000566703 GRB7Q14451 532 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 GRM7Q14831 915 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 TMED2Q15363 201 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 CYP2A13Q16696 494 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 EIF2S3LQ2VIR3 472 aaKnown RBP14.4□□□□□ -0.1
RNF40-209ENST00000566703 FAM214AQ32MH5 1076 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 PRR30Q53SZ7 412 aaPredicted RBP14.4□□□□□ -0.1
RNF40-209ENST00000566703 CRB2Q5IJ48 1285 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 FIGLAQ6QHK4 219 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 C4orf22Q6V702 233 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 LRRC6Q86X45 466 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 VRK3Q8IV63 474 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 MPP5Q8N3R9 675 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 ZADH2Q8N4Q0 377 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 PPHLN1Q8NEY8 458 aaKnown RBP14.4□□□□□ -0.1
RNF40-209ENST00000566703 RAD51AP1Q96B01 352 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 SNRNP40Q96DI7 357 aaKnown RBP14.4□□□□□ -0.1
RNF40-209ENST00000566703 VPS50Q96JG6 964 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 ZNF285Q96NJ3 590 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 SLC26A1Q9H2B4 701 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 LUZP4Q9P127 313 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 SLC39A10Q9ULF5 831 aa14.4□□□□□ -0.1
RNF40-209ENST00000566703 A0A1B0GX78 115 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 WIPF3A6NGB9 483 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 RASGRF2O14827 1237 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 DSCR3O14972 297 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 CBX6O95503 412 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 APRTP07741 180 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 NPY2RP49146 381 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 CSE1LP55060 971 aaKnown RBP14.39□□□□□ -0.11
RNF40-209ENST00000566703 RAPSNQ13702 412 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 SEMA3AQ14563 771 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 SF1Q15637 639 aaKnown RBP14.39□□□□□ -0.11
RNF40-209ENST00000566703 PTRHD1Q6GMV3 140 aaKnown RBP14.39□□□□□ -0.11
RNF40-209ENST00000566703 Q6ZS92 163 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 FAM20CQ8IXL6 584 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 RAB42Q8N4Z0 105 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 CFAP61Q8NHU2 1237 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 GSDMBQ8TAX9 411 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 HMGCLL1Q8TB92 370 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 COG1Q8WTW3 980 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 C1orf54Q8WWF1 131 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 BARD1Q99728 777 aaKnown RBP14.39□□□□□ -0.11
RNF40-209ENST00000566703 MRM3Q9HC36 420 aaKnown RBP14.39□□□□□ -0.11
RNF40-209ENST00000566703 EIF2B3Q9NR50 452 aaKnown RBP14.39□□□□□ -0.11
RNF40-209ENST00000566703 CATSPERZQ9NTU4 200 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 MAP10Q9P2G4 905 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 NXT1Q9UKK6 140 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms