RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 PABPN1LA6NDY0 278 aaKnown RBP25.27■■□□□ 1.64
NME3-209ENST00000566600 FAM155BO75949 473 aa25.27■■□□□ 1.64
NME3-209ENST00000566600 UGT2B7P16662 529 aa25.27■■□□□ 1.64
NME3-209ENST00000566600 HSD11B2P80365 405 aa25.27■■□□□ 1.64
NME3-209ENST00000566600 MC2RQ01718 297 aa25.27■■□□□ 1.64
NME3-209ENST00000566600 CYP2A13Q16696 494 aa25.27■■□□□ 1.64
NME3-209ENST00000566600 SLC5A12Q1EHB4 618 aa25.27■■□□□ 1.64
NME3-209ENST00000566600 TBC1D25Q3MII6 688 aa25.27■■□□□ 1.64
NME3-209ENST00000566600 CEP97Q8IW35 865 aa25.27■■□□□ 1.64
NME3-209ENST00000566600 OR2A14Q96R47 310 aa25.27■■□□□ 1.64
NME3-209ENST00000566600 PKP4Q99569 1192 aa25.27■■□□□ 1.64
NME3-209ENST00000566600 TXLNGYQ9BZA5 131 aa25.27■■□□□ 1.64
NME3-209ENST00000566600 ASPSCR1Q9BZE9 553 aa25.27■■□□□ 1.64
NME3-209ENST00000566600 PARVBQ9HBI1 364 aa25.27■■□□□ 1.64
NME3-209ENST00000566600 SLC39A1Q9NY26 324 aa25.27■■□□□ 1.64
NME3-209ENST00000566600 SPHK1Q9NYA1 384 aa25.27■■□□□ 1.64
NME3-209ENST00000566600 CDRT15L2A8MXV6 281 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 NVLO15381 856 aaKnown RBP25.26■■□□□ 1.63
NME3-209ENST00000566600 FKBP9O95302 570 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 SYF2O95926 243 aaKnown RBP25.26■■□□□ 1.63
NME3-209ENST00000566600 INHBAP08476 426 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 HIST1H2AGP0C0S8 130 aaPredicted RBP25.26■■□□□ 1.63
NME3-209ENST00000566600 HIST1H2ADP20671 130 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 PGGT1BP53609 377 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 RAB10P61026 200 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 UAP1Q16222 522 aaPredicted RBP25.26■■□□□ 1.63
NME3-209ENST00000566600 TMTC4Q5T4D3 741 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 UBAP2Q5T6F2 1119 aaKnown RBP25.26■■□□□ 1.63
NME3-209ENST00000566600 CLEC14AQ86T13 490 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 SPNS2Q8IVW8 549 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 BMPERQ8N8U9 685 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 DENND1AQ8TEH3 1009 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 MRRFQ96E11 262 aaKnown RBP25.26■■□□□ 1.63
NME3-209ENST00000566600 HIST1H2AHQ96KK5 128 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 HIST1H2AJQ99878 128 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 H2AFJQ9BTM1 129 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 DDA1Q9BW61 102 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 TRIM54Q9BYV2 358 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 CAB39LQ9H9S4 337 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 PCDHB11Q9Y5F2 797 aa25.26■■□□□ 1.63
NME3-209ENST00000566600 RIPK2O43353 540 aa25.25■■□□□ 1.63
NME3-209ENST00000566600 CAPNS1P04632 268 aa25.25■■□□□ 1.63
NME3-209ENST00000566600 ENO2P09104 434 aaPredicted RBP25.25■■□□□ 1.63
NME3-209ENST00000566600 MYBL2P10244 700 aa25.25■■□□□ 1.63
NME3-209ENST00000566600 ERGP11308 486 aa25.25■■□□□ 1.63
NME3-209ENST00000566600 ETV5P41161 510 aa25.25■■□□□ 1.63
NME3-209ENST00000566600 ZNF460Q14592 562 aa25.25■■□□□ 1.63
NME3-209ENST00000566600 ZKSCAN8Q15776 578 aaPredicted RBP25.25■■□□□ 1.63
NME3-209ENST00000566600 DCAF12Q5T6F0 453 aa25.25■■□□□ 1.63
NME3-209ENST00000566600 TMEM207Q6UWW9 146 aa25.25■■□□□ 1.63
NME3-209ENST00000566600 TAOK1Q7L7X3 1001 aa25.25■■□□□ 1.63
NME3-209ENST00000566600 GSPT2Q8IYD1 628 aaKnown RBP25.25■■□□□ 1.63
NME3-209ENST00000566600 KDF1Q8NAX2 398 aaPredicted RBP25.25■■□□□ 1.63
NME3-209ENST00000566600 SLC44A1Q8WWI5 657 aa25.25■■□□□ 1.63
NME3-209ENST00000566600 ZCCHC14Q8WYQ9 949 aaKnown RBP25.25■■□□□ 1.63
NME3-209ENST00000566600 USP7Q93009 1102 aa25.25■■□□□ 1.63
NME3-209ENST00000566600 CCDC138Q96M89 665 aa25.25■■□□□ 1.63
NME3-209ENST00000566600 TEFMQ96QE5 360 aaKnown RBP25.25■■□□□ 1.63
NME3-209ENST00000566600 ZPBPQ9BS86 351 aa25.25■■□□□ 1.63
NME3-209ENST00000566600 SOHLH2Q9NX45 425 aa25.25■■□□□ 1.63
NME3-209ENST00000566600 SIDT1Q9NXL6 827 aaKnown RBP25.25■■□□□ 1.63
NME3-209ENST00000566600 ADAMTS6Q9UKP5 1117 aa25.25■■□□□ 1.63
NME3-209ENST00000566600 BTRCQ9Y297 605 aa25.25■■□□□ 1.63
NME3-209ENST00000566600 PCDHGA3Q9Y5H0 932 aa25.25■■□□□ 1.63
NME3-209ENST00000566600 ACACBO00763 2458 aa25.24■■□□□ 1.63
NME3-209ENST00000566600 A0A0J9YY10 115 aa25.24■■□□□ 1.63
NME3-209ENST00000566600 SLC9B1P1A6NJY1 282 aa25.24■■□□□ 1.63
NME3-209ENST00000566600 CRABP2P29373 138 aa25.24■■□□□ 1.63
NME3-209ENST00000566600 OAS2P29728 719 aaKnown RBP25.24■■□□□ 1.63
NME3-209ENST00000566600 MSH2P43246 934 aa25.24■■□□□ 1.63
NME3-209ENST00000566600 SERPINB9P50453 376 aa25.24■■□□□ 1.63
NME3-209ENST00000566600 PNLIPRP1P54315 467 aa25.24■■□□□ 1.63
NME3-209ENST00000566600 CEACAM20Q6UY09 585 aa25.24■■□□□ 1.63
NME3-209ENST00000566600 CCDC91Q7Z6B0 441 aa25.24■■□□□ 1.63
NME3-209ENST00000566600 D2HGDHQ8N465 521 aa25.24■■□□□ 1.63
NME3-209ENST00000566600 C2orf73Q8N5S3 287 aaPredicted RBP25.24■■□□□ 1.63
NME3-209ENST00000566600 FLVCR1-AS1Q8TAF5 88 aa25.24■■□□□ 1.63
NME3-209ENST00000566600 SMPDL3AQ92484 453 aa25.24■■□□□ 1.63
NME3-209ENST00000566600 FGF11Q92914 225 aa25.24■■□□□ 1.63
NME3-209ENST00000566600 NOVA2Q9UNW9 492 aaKnown RBP25.24■■□□□ 1.63
NME3-209ENST00000566600 PDE10AQ9Y233 779 aa25.24■■□□□ 1.63
NME3-209ENST00000566600 KRT87PA6NCN2 255 aa25.23■■□□□ 1.63
NME3-209ENST00000566600 POLR1CO15160 346 aaPredicted RBP25.23■■□□□ 1.63
NME3-209ENST00000566600 PHGDHO43175 533 aaKnown RBP25.23■■□□□ 1.63
NME3-209ENST00000566600 SLC16A8O95907 504 aa25.23■■□□□ 1.63
NME3-209ENST00000566600 PEBP1P30086 187 aaKnown RBP25.23■■□□□ 1.63
NME3-209ENST00000566600 AP1S2P56377 157 aa25.23■■□□□ 1.63
NME3-209ENST00000566600 ACY1Q03154 408 aa25.23■■□□□ 1.63
NME3-209ENST00000566600 FOXM1Q08050 763 aa25.23■■□□□ 1.63
NME3-209ENST00000566600 IL11RAQ14626 422 aa25.23■■□□□ 1.63
NME3-209ENST00000566600 SF1Q15637 639 aaKnown RBP25.23■■□□□ 1.63
NME3-209ENST00000566600 FBXO38Q6PIJ6 1188 aa25.23■■□□□ 1.63
NME3-209ENST00000566600 TAX1BP1Q86VP1 789 aa25.23■■□□□ 1.63
NME3-209ENST00000566600 BPHLQ86WA6 291 aaPredicted RBP25.23■■□□□ 1.63
NME3-209ENST00000566600 DLG3Q92796 817 aa25.23■■□□□ 1.63
NME3-209ENST00000566600 PPM1MQ96MI6 270 aa25.23■■□□□ 1.63
NME3-209ENST00000566600 TRAPPC9Q96Q05 1148 aa25.23■■□□□ 1.63
NME3-209ENST00000566600 PAFAH2Q99487 392 aa25.23■■□□□ 1.63
NME3-209ENST00000566600 DERL2Q9GZP9 239 aa25.23■■□□□ 1.63
NME3-209ENST00000566600 PDE7BQ9NP56 450 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms