RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 NUDT21O43809 227 aaKnown RBP3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 LANCL1O43813 399 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 KIF5CO60282 957 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 ATG13O75143 517 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 SPAG6O75602 509 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 TOM1L1O75674 476 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 IDH1O75874 414 aaKnown RBP3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 CLDN7O95471 211 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 GSRP00390 522 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 UGT2B4P06133 528 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 OR2T7P0C7T2 308 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 RPA2P15927 270 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 ZNF18P17022 549 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 ACO1P21399 889 aaKnown RBP3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 CALB2P22676 271 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 HRH2P25021 359 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 HLA-FP30511 346 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 HTR6P50406 440 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 CNN1P51911 297 aaKnown RBP3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 HUNKP57058 714 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 NUCB2P80303 420 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 DLK1P80370 383 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 EGR4Q05215 589 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 PRKCZQ05513 592 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 DMTNQ08495 405 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 PTPRRQ15256 657 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 ACKR1Q16570 336 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 CCDC142Q17RM4 750 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 FILIP1LQ4L180 1135 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 XKR9Q5GH70 373 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 KLHL10Q6JEL2 608 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 ARMC6Q6NXE6 501 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 METTL2BQ6P1Q9 378 aaKnown RBP3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 FAM198BQ6UWH4 519 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 ANGPTL8Q6UXH0 198 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 B3GLCTQ6Y288 498 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 SIGLEC15Q6ZMC9 328 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 OTUD6AQ7L8S5 288 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 TAS2R42Q7RTR8 314 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 SLC29A4Q7RTT9 530 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 IRF2BP2Q7Z5L9 587 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 ASPGQ86U10 573 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 RTN4RL2Q86UN3 420 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 MB21D2Q8IYB1 491 aaPredicted RBP3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 ZNF679Q8IYX0 411 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 LNX2Q8N448 690 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 SLC44A3Q8N4M1 653 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 EMC1Q8N766 993 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 EIF1ADQ8N9N8 165 aaKnown RBP3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 MCPH1Q8NEM0 835 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 AKR7LQ8NHP1 331 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 ARRDC2Q8TBH0 407 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 ACTRT2Q8TDY3 377 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 ASB10Q8WXI3 467 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 SNAPC3Q92966 411 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 FBXO32Q969P5 355 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 LENG9Q96B70 501 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 GRAMD2BQ96HH9 432 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 METTL2AQ96IZ6 378 aaKnown RBP3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 Q96MF0 132 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 ZNF582Q96NG8 517 aaPredicted RBP3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 TMEM79Q9BSE2 394 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 TRMT61BQ9BVS5 477 aaKnown RBP3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 GATA5Q9BWX5 397 aaPredicted RBP3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 TBC1D10AQ9BXI6 508 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 GON7Q9BXV9 100 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 CAPS2Q9BXY5 557 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 SIRPDQ9H106 197 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 SEMA6AQ9H2E6 1030 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 ESRP2Q9H6T0 727 aaKnown RBP3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 LRRC40Q9H9A6 602 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 CRLF2Q9HC73 371 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 MKKSQ9NPJ1 570 aaPredicted RBP3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 YAE1D1Q9NRH1 226 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 SERINC1Q9NRX5 453 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 SERTAD4Q9NUC0 356 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 DONSONQ9NYP3 566 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 AIPL1Q9NZN9 384 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 UTS2RQ9UKP6 389 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 TTC7AQ9ULT0 858 aaPredicted RBP3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 CLEC4AQ9UMR7 237 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 NSD2O96028 1365 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 IQSEC2Q5JU85 1478 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 TTC21BQ7Z4L5 1316 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 WDR19Q8NEZ3 1342 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 TRBV5-7A0A0A0MS05 114 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 C15orf38-AP3S2A0A0A6YYH1 394 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 PRSS51A0A1B0GVH4 220 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 FAM230AA0A1W2PPH8 454 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 A0A1W2PPQ1 181 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 XKRY2A2RUG3 117 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 C17orf102A2RUQ5 167 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 FAM149AA5PLN7 773 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 ANKDD1BA6NHY2 528 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 B4DGG1 531 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 HSPB6O14558 160 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 INPPL1O15357 1258 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 GPRIN2O60269 458 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 CIB2O75838 187 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 DDNO94850 711 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms