RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 ZFP28Q8NHY6 868 aa18.23■□□□□ 0.51
MSLN-207ENST00000566549 MCOLN3Q8TDD5 553 aa18.23■□□□□ 0.51
MSLN-207ENST00000566549 APOLD1Q96LR9 279 aa18.23■□□□□ 0.51
MSLN-207ENST00000566549 SNX6Q9UNH7 406 aa18.23■□□□□ 0.51
MSLN-207ENST00000566549 IRAK3Q9Y616 596 aa18.23■□□□□ 0.51
MSLN-207ENST00000566549 CXorf51AA0A1B0GTR3 108 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 H3BNH8 94 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 TSPAN6O43657 245 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 TLL1O43897 1013 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 GMNNO75496 209 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 CDH1P12830 882 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 ZNF30P17039 623 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 CEBPBP17676 345 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 DDX6P26196 483 aaKnown RBP eCLIP18.22■□□□□ 0.51
MSLN-207ENST00000566549 PBLDP30039 288 aaPredicted RBP18.22■□□□□ 0.51
MSLN-207ENST00000566549 METAP1P53582 386 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 CTSCP53634 463 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 PLEKHS1Q5SXH7 462 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 GLB1L3Q8NCI6 653 aaPredicted RBP18.22■□□□□ 0.51
MSLN-207ENST00000566549 PAPD5Q8NDF8 572 aaKnown RBP18.22■□□□□ 0.51
MSLN-207ENST00000566549 DGCR14Q96DF8 476 aaKnown RBP18.22■□□□□ 0.51
MSLN-207ENST00000566549 LRRC3BQ96PB8 259 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 WRAP53Q9BUR4 548 aaKnown RBP18.22■□□□□ 0.51
MSLN-207ENST00000566549 DNAJC11Q9NVH1 559 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 IL36AQ9UHA7 158 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 MAGED1Q9Y5V3 778 aaPredicted RBP18.22■□□□□ 0.51
MSLN-207ENST00000566549 PLXNB3Q9ULL4 1909 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 KCNE1BA0A087WTH5 132 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 SH3BGRLO75368 114 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 SYN1P17600 705 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 BMPR1AP36894 532 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 MESP2Q0VG99 397 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 CHIT1Q13231 466 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 DDX39BQ13838 428 aaKnown RBP18.22■□□□□ 0.51
MSLN-207ENST00000566549 CCSMST1Q4G0I0 132 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 SYTL3Q4VX76 610 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 PRR23BQ6ZRT6 265 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 C10orf111Q8N326 155 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 OSCP1Q8WVF1 389 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 MED8Q96G25 268 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 TBC1D14Q9P2M4 693 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 UTS2RQ9UKP6 389 aa18.22■□□□□ 0.51
MSLN-207ENST00000566549 GFYI3L273 518 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 SNAP29O95721 258 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 HNMTP50135 292 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 CYP2U1Q7Z449 544 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 RBM23Q86U06 439 aaKnown RBP18.21■□□□□ 0.51
MSLN-207ENST00000566549 C12orf40Q86WS4 652 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 RAVER1Q8IY67 606 aaKnown RBP18.21■□□□□ 0.51
MSLN-207ENST00000566549 TCAIMQ8N3R3 496 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 ZNF548Q8NEK5 533 aaPredicted RBP18.21■□□□□ 0.51
MSLN-207ENST00000566549 SPPL3Q8TCT6 385 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 ASZ1Q8WWH4 475 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 BADQ92934 168 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 NCLNQ969V3 563 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 TMIGD2Q96BF3 282 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 INPP5KQ9BT40 448 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 LIMD1Q9UGP4 676 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 INVSQ9Y283 1065 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 PCDHB14Q9Y5E9 798 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 A0A1W2PQ67 120 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 C16orf96A6NNT2 1141 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 EIF3FO00303 357 aaPredicted RBP18.21■□□□□ 0.51
MSLN-207ENST00000566549 KPNA3O00505 521 aaPredicted RBP18.21■□□□□ 0.51
MSLN-207ENST00000566549 MPC1LP0DKB6 136 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 SDC1P18827 310 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 RPS9P46781 194 aaKnown RBP18.21■□□□□ 0.51
MSLN-207ENST00000566549 NR1H2P55055 460 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 PFN3P60673 137 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 DMC1Q14565 340 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 ACOX1Q15067 660 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 SF1Q15637 639 aaKnown RBP18.21■□□□□ 0.51
MSLN-207ENST00000566549 ZNF284Q2VY69 593 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.21■□□□□ 0.51
MSLN-207ENST00000566549 HENMT1Q5T8I9 393 aaKnown RBP18.21■□□□□ 0.51
MSLN-207ENST00000566549 TTC33Q6PID6 262 aaPredicted RBP18.21■□□□□ 0.51
MSLN-207ENST00000566549 CDC26Q8NHZ8 85 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 BPIFB1Q8TDL5 484 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 EPB41L1Q9H4G0 881 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 NDUFA13Q9P0J0 144 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 ADGRE2Q9UHX3 823 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 COQ6Q9Y2Z9 468 aa18.21■□□□□ 0.51
MSLN-207ENST00000566549 ARHGEF33A8MVX0 844 aa18.2■□□□□ 0.5
MSLN-207ENST00000566549 CLOCKO15516 846 aa18.2■□□□□ 0.5
MSLN-207ENST00000566549 ELFN1P0C7U0 828 aa18.2■□□□□ 0.5
MSLN-207ENST00000566549 BDKRB1P46663 353 aa18.2■□□□□ 0.5
MSLN-207ENST00000566549 ROR2Q01974 943 aaKnown RBP18.2■□□□□ 0.5
MSLN-207ENST00000566549 NKG7Q16617 165 aa18.2■□□□□ 0.5
MSLN-207ENST00000566549 SMU1Q2TAY7 513 aa18.2■□□□□ 0.5
MSLN-207ENST00000566549 ZIK1Q3SY52 487 aaPredicted RBP18.2■□□□□ 0.5
MSLN-207ENST00000566549 SLC36A3Q495N2 470 aa18.2■□□□□ 0.5
MSLN-207ENST00000566549 RNF165Q6ZSG1 346 aa18.2■□□□□ 0.5
MSLN-207ENST00000566549 RIMKLAQ8IXN7 391 aa18.2■□□□□ 0.5
MSLN-207ENST00000566549 RASGEF1AQ8N9B8 481 aa18.2■□□□□ 0.5
MSLN-207ENST00000566549 NCSTNQ92542 709 aa18.2■□□□□ 0.5
MSLN-207ENST00000566549 FAM162AQ96A26 154 aa18.2■□□□□ 0.5
MSLN-207ENST00000566549 MTERF1Q99551 399 aaKnown RBP18.2■□□□□ 0.5
MSLN-207ENST00000566549 BDH2Q9BUT1 245 aa18.2■□□□□ 0.5
MSLN-207ENST00000566549 SMPD3Q9NY59 655 aaPredicted RBP18.2■□□□□ 0.5
MSLN-207ENST00000566549 PPT2Q9UMR5 302 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms