RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 IL1RAPL1Q9NZN1 696 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.15■□□□□ 0.18
USB1-211ENST00000565662 ANKMY1Q9P2S6 941 aa16.15■□□□□ 0.18
USB1-211ENST00000565662 CDC14CA4D256 554 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 CTAGE9A4FU28 777 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 CCNDBP1O95273 360 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 CATP04040 527 aaKnown RBP16.14■□□□□ 0.17
USB1-211ENST00000565662 CBSLP0DN79 551 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 PKMP14618 531 aaKnown RBP16.14■□□□□ 0.17
USB1-211ENST00000565662 CHRM3P20309 590 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 ARNTP27540 789 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 CBSP35520 551 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 MAGEA3P43357 314 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 GPS2Q13227 327 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 PTK6Q13882 451 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 TRIP13Q15645 432 aaPredicted RBP16.14■□□□□ 0.17
USB1-211ENST00000565662 ANKRD20A4Q4UJ75 823 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 ZNF470Q6ECI4 717 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 TTC27Q6P3X3 843 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 CDHR3Q6ZTQ4 885 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 CAND1Q86VP6 1230 aaKnown RBP16.14■□□□□ 0.17
USB1-211ENST00000565662 ZBTB2Q8N680 514 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 OR1L3Q8NH93 324 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 BIRC8Q96P09 236 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 NDC1Q9BTX1 674 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 ENAMQ9NRM1 1142 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 PCMTD2Q9NV79 361 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 IRAK4Q9NWZ3 460 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 ASIC3Q9UHC3 531 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 PCYOX1Q9UHG3 505 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 GPN3Q9UHW5 284 aaPredicted RBP16.14■□□□□ 0.17
USB1-211ENST00000565662 KLK4Q9Y5K2 254 aa16.14■□□□□ 0.17
USB1-211ENST00000565662 PIEZO2Q9H5I5 2752 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 CCDC188H7C350 402 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 ZNF749O43361 778 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 SUV39H1O43463 412 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 TMEM63AO94886 807 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 C1orf105O95561 183 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 F8A1P23610 371 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 CSE1LP55060 971 aaKnown RBP16.13■□□□□ 0.17
USB1-211ENST00000565662 ABRQ12979 859 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 GBX1Q14549 363 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 NCF4Q15080 339 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 ZNF789Q5FWF6 425 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 NAT8LQ8N9F0 302 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 TMEM102Q8N9M5 508 aaPredicted RBP16.13■□□□□ 0.17
USB1-211ENST00000565662 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.13■□□□□ 0.17
USB1-211ENST00000565662 FBXO15Q8NCQ5 510 aaPredicted RBP16.13■□□□□ 0.17
USB1-211ENST00000565662 CFAP61Q8NHU2 1237 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 LRRC39Q96DD0 335 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 CHST8Q9H2A9 424 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 NDOR1Q9UHB4 597 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 TCFL5Q9UL49 500 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 NEU2Q9Y3R4 380 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 PCDHGA9Q9Y5G4 932 aaKnown RBP16.13■□□□□ 0.17
USB1-211ENST00000565662 MRPS18BQ9Y676 258 aaKnown RBP16.13■□□□□ 0.17
USB1-211ENST00000565662 ZNF462Q96JM2 2506 aa16.13■□□□□ 0.17
USB1-211ENST00000565662 TCRBV7S3A2A0A539 114 aa16.12■□□□□ 0.17
USB1-211ENST00000565662 IQCF5A8MTL0 148 aa16.12■□□□□ 0.17
USB1-211ENST00000565662 SRPX2O60687 465 aaPredicted RBP16.12■□□□□ 0.17
USB1-211ENST00000565662 MATN4O95460 622 aa16.12■□□□□ 0.17
USB1-211ENST00000565662 PGAM1P18669 254 aa16.12■□□□□ 0.17
USB1-211ENST00000565662 PAFAH1B1P43034 410 aa16.12■□□□□ 0.17
USB1-211ENST00000565662 DCDP81605 110 aaKnown RBP16.12■□□□□ 0.17
USB1-211ENST00000565662 SF1Q15637 639 aaKnown RBP16.12■□□□□ 0.17
USB1-211ENST00000565662 CTSL3PQ5NE16 218 aa16.12■□□□□ 0.17
USB1-211ENST00000565662 KIAA0408Q6ZU52 694 aa16.12■□□□□ 0.17
USB1-211ENST00000565662 MED25Q71SY5 747 aa16.12■□□□□ 0.17
USB1-211ENST00000565662 LDB1Q86U70 411 aaPredicted RBP16.12■□□□□ 0.17
USB1-211ENST00000565662 KRT222Q8N1A0 295 aa16.12■□□□□ 0.17
USB1-211ENST00000565662 LMNTD1Q8N9Z9 388 aa16.12■□□□□ 0.17
USB1-211ENST00000565662 TTC29Q8NA56 475 aaPredicted RBP16.12■□□□□ 0.17
USB1-211ENST00000565662 LKAAEAR1Q8TD35 194 aa16.12■□□□□ 0.17
USB1-211ENST00000565662 FKBP10Q96AY3 582 aa16.12■□□□□ 0.17
USB1-211ENST00000565662 MS4A14Q96JA4 679 aa16.12■□□□□ 0.17
USB1-211ENST00000565662 PPM1MQ96MI6 270 aa16.12■□□□□ 0.17
USB1-211ENST00000565662 MENTQ9BUN1 341 aa16.12■□□□□ 0.17
USB1-211ENST00000565662 ACSS2Q9NR19 701 aa16.12■□□□□ 0.17
USB1-211ENST00000565662 CORO1CQ9ULV4 474 aaPredicted RBP16.12■□□□□ 0.17
USB1-211ENST00000565662 MAD1L1Q9Y6D9 718 aa16.12■□□□□ 0.17
USB1-211ENST00000565662 TLN1Q9Y490 2541 aaKnown RBP16.11■□□□□ 0.17
USB1-211ENST00000565662 DNALI1O14645 258 aaPredicted RBP16.11■□□□□ 0.17
USB1-211ENST00000565662 VPS26AO75436 327 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 PVRP15151 417 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 ITGAXP20702 1163 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 MAGP20916 626 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 CMPK1P30085 196 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 FMO4P31512 558 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 SKIV2L2P42285 1042 aaKnown RBP16.11■□□□□ 0.17
USB1-211ENST00000565662 KLRB1Q12918 225 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 GRM7Q14831 915 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 MORF4L2Q15014 288 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 FAM214AQ32MH5 1076 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 FBXO38Q6PIJ6 1188 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 FAM198BQ6UWH4 519 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 GALNT7Q86SF2 657 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 VRK3Q8IV63 474 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 PDIK1LQ8N165 341 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 ENDOVQ8N8Q3 282 aaKnown RBP16.11■□□□□ 0.17
USB1-211ENST00000565662 FLVCR1-AS1Q8TAF5 88 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms