RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 SEC16AO15027 2179 aa11.14□□□□□ -0.63
NSMCE1-209ENST00000565384 NUP210LQ5VU65 1888 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 A0A1B0GX78 115 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 OR51F1A6NGY5 319 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 SOCS6O14544 535 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 ZNF189O75820 626 aaPredicted RBP11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 OR56A5P0C7T3 313 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 TNFRSF8P28908 595 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 PKLRP30613 574 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 FOXN2P32314 431 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 TSFMP43897 325 aaKnown RBP11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 ARSFP54793 590 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 PLOD1Q02809 727 aaPredicted RBP11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 PARP6Q2NL67 630 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 AADACL2Q6P093 401 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 IGFL2Q6UWQ7 119 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 ARHGEF18Q6ZSZ5 1173 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 TTLL10Q6ZVT0 673 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 COX15Q7KZN9 410 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 OVCH1Q7RTY7 1134 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 KCNMB4Q86W47 210 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 TMEM139Q8IV31 216 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 ALS2CR12Q96Q35 445 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 SPSB2Q99619 263 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 LRRC40Q9H9A6 602 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 PIH1D1Q9NWS0 290 aaKnown RBP11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 KLHL20Q9Y2M5 609 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 HS3ST3B1Q9Y662 390 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 CROCCQ5TZA2 2017 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 CCDC88CQ9P219 2028 aa11.13□□□□□ -0.63
NSMCE1-209ENST00000565384 CCDC162PA2VCL2 907 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 ESPNB1AK53 854 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 LRRTM2O43300 516 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 TJP3O95049 919 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 METTL18O95568 372 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 ALBP02768 609 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 PIM1P11309 404 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 EDN3P14138 238 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 PSMA3P25788 255 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 RAB28P51157 221 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 CSE1LP55060 971 aaKnown RBP11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 PER3P56645 1201 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 RWDD2BP57060 319 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 CDC16Q13042 620 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 ZNF169Q14929 603 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 SPA17Q15506 151 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 NKG7Q16617 165 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 AGAP7PQ5VUJ5 663 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 IRAK1BP1Q5VVH5 260 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 MCATQ8IVS2 390 aaKnown RBP11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 LINC01555Q8NAE3 123 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 DNAJB14Q8TBM8 379 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 GRHL3Q8TE85 626 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 DENND1AQ8TEH3 1009 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 COG1Q8WTW3 980 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 CNDP1Q96KN2 507 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 AGAP4Q96P64 663 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 MENTQ9BUN1 341 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 SLC26A1Q9H2B4 701 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 SOX17Q9H6I2 414 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 EPS8L2Q9H6S3 715 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 WDR54Q9H977 334 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 MRM3Q9HC36 420 aaKnown RBP11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 OSGIN2Q9Y236 505 aa11.12□□□□□ -0.63
NSMCE1-209ENST00000565384 MROH6A6NGR9 719 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 DSCR3O14972 297 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 OR1I1O60431 355 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 ONECUT2O95948 504 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 MCM3P25205 808 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 CETN2P41208 172 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 GRM7Q14831 915 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 ZRSR2Q15696 482 aaKnown RBP11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 RBBP7Q16576 425 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 P3H1Q32P28 736 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 TUBB8Q3ZCM7 444 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 CCDC38Q502W7 563 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 DNAJC21Q5F1R6 531 aaKnown RBP11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 B3GNTL1Q67FW5 361 aaPredicted RBP11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 KIRREL2Q6UWL6 708 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 SHISA6Q6ZSJ9 500 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 TAX1BP1Q86VP1 789 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 PARP9Q8IXQ6 854 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 SRRM1Q8IYB3 904 aaKnown RBP11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 SLC22A15Q8IZD6 547 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 SLC34A3Q8N130 599 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 C2orf73Q8N5S3 287 aaPredicted RBP11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 METTL27Q8N6F8 245 aaPredicted RBP11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 FAM71DQ8N9W8 422 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 LMNTD1Q8N9Z9 388 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 TTC29Q8NA56 475 aaPredicted RBP11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 FAR1Q8WVX9 515 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 ALG3Q92685 438 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 IL17FQ96PD4 163 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 LHPPQ9H008 270 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 LUC7LQ9NQ29 371 aaKnown RBP11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 CUTCQ9NTM9 273 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 CTSFQ9UBX1 484 aa11.11□□□□□ -0.63
NSMCE1-209ENST00000565384 CIDEBQ9UHD4 219 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms