RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 MRPS17Q9Y2R5 130 aaKnown RBP19.01■□□□□ 0.63
CLN6-205ENST00000564846 GPR45Q9Y5Y3 372 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 KCNE1BA0A087WTH5 132 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 IFRD1O00458 451 aaPredicted RBP19.01■□□□□ 0.63
CLN6-205ENST00000564846 FPGTO14772 594 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 LSM1O15116 133 aaKnown RBP19.01■□□□□ 0.63
CLN6-205ENST00000564846 IGLV3-19P01714 112 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 SNRPB2P08579 225 aaKnown RBP19.01■□□□□ 0.63
CLN6-205ENST00000564846 NUDT2P50583 147 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 RAP1GDS1P52306 607 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 KIAA1024LP59773 190 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 NR6A1Q15406 480 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 CPSF6Q16630 551 aaKnown RBP eCLIP19.01■□□□□ 0.63
CLN6-205ENST00000564846 SMU1Q2TAY7 513 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 C16orf89Q6UX73 402 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 GK5Q6ZS86 529 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 CHST15Q7LFX5 561 aaPredicted RBP19.01■□□□□ 0.63
CLN6-205ENST00000564846 GALNT13Q8IUC8 556 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 DCUN1D3Q8IWE4 304 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 PGBD3Q8N328 593 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 FNDC5Q8NAU1 212 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 TFGQ92734 400 aaPredicted RBP19.01■□□□□ 0.63
CLN6-205ENST00000564846 RAD51AP1Q96B01 352 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 AIG1Q9NVV5 245 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 CA14Q9ULX7 337 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 CCL27Q9Y4X3 112 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 FUCA1P04066 466 aa19■□□□□ 0.63
CLN6-205ENST00000564846 HNRNPA2B1P22626 353 aaKnown RBP19■□□□□ 0.63
CLN6-205ENST00000564846 EMX2Q04743 252 aa19■□□□□ 0.63
CLN6-205ENST00000564846 PYCR3Q53H96 274 aa19■□□□□ 0.63
CLN6-205ENST00000564846 CAPN13Q6MZZ7 669 aaPredicted RBP19■□□□□ 0.63
CLN6-205ENST00000564846 PAOXQ6QHF9 649 aa19■□□□□ 0.63
CLN6-205ENST00000564846 SCUBE1Q8IWY4 988 aa19■□□□□ 0.63
CLN6-205ENST00000564846 PARP9Q8IXQ6 854 aa19■□□□□ 0.63
CLN6-205ENST00000564846 SYTL1Q8IYJ3 562 aa19■□□□□ 0.63
CLN6-205ENST00000564846 FLCNQ8NFG4 579 aa19■□□□□ 0.63
CLN6-205ENST00000564846 SPDYE1Q8NFV5 336 aaPredicted RBP19■□□□□ 0.63
CLN6-205ENST00000564846 RCN3Q96D15 328 aa19■□□□□ 0.63
CLN6-205ENST00000564846 SCARF2Q96GP6 870 aaPredicted RBP19■□□□□ 0.63
CLN6-205ENST00000564846 MRPL1Q9BYD6 325 aaKnown RBP19■□□□□ 0.63
CLN6-205ENST00000564846 BRINP2Q9C0B6 783 aa19■□□□□ 0.63
CLN6-205ENST00000564846 ELOVL6Q9H5J4 265 aa19■□□□□ 0.63
CLN6-205ENST00000564846 LMAN1LQ9HAT1 526 aa19■□□□□ 0.63
CLN6-205ENST00000564846 TMEM45AQ9NWC5 275 aa19■□□□□ 0.63
CLN6-205ENST00000564846 GPRC5BQ9NZH0 403 aa19■□□□□ 0.63
CLN6-205ENST00000564846 EBF1Q9UH73 591 aa19■□□□□ 0.63
CLN6-205ENST00000564846 CIDEBQ9UHD4 219 aa19■□□□□ 0.63
CLN6-205ENST00000564846 ZFC3H1O60293 1989 aaKnown RBP19■□□□□ 0.63
CLN6-205ENST00000564846 WFS1O76024 890 aa18.99■□□□□ 0.63
CLN6-205ENST00000564846 SEMA4FO95754 770 aa18.99■□□□□ 0.63
CLN6-205ENST00000564846 SLC35G4P0C7Q5 338 aa18.99■□□□□ 0.63
CLN6-205ENST00000564846 ACP5P13686 325 aa18.99■□□□□ 0.63
CLN6-205ENST00000564846 JUPP14923 745 aa18.99■□□□□ 0.63
CLN6-205ENST00000564846 KELP23276 732 aa18.99■□□□□ 0.63
CLN6-205ENST00000564846 HALP42357 657 aa18.99■□□□□ 0.63
CLN6-205ENST00000564846 DIO3P55073 304 aa18.99■□□□□ 0.63
CLN6-205ENST00000564846 IRF8Q02556 426 aa18.99■□□□□ 0.63
CLN6-205ENST00000564846 ZNF33BQ06732 778 aa18.99■□□□□ 0.63
CLN6-205ENST00000564846 CHIT1Q13231 466 aa18.99■□□□□ 0.63
CLN6-205ENST00000564846 WASHC2DQ5SRD0 308 aa18.99■□□□□ 0.63
CLN6-205ENST00000564846 HBEGFQ99075 208 aa18.99■□□□□ 0.63
CLN6-205ENST00000564846 MYOCQ99972 504 aa18.99■□□□□ 0.63
CLN6-205ENST00000564846 KCNE2Q9Y6J6 123 aa18.99■□□□□ 0.63
CLN6-205ENST00000564846 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.99■□□□□ 0.63
CLN6-205ENST00000564846 A8MUI8 341 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 CLGNO14967 610 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 LATO43561 262 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 GNAZP19086 355 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 MAD2L1Q13257 205 aaPredicted RBP18.98■□□□□ 0.63
CLN6-205ENST00000564846 ART3Q13508 389 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 IMPG1Q17R60 797 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 AP5B1Q2VPB7 878 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 PDCD4Q53EL6 469 aaKnown RBP18.98■□□□□ 0.63
CLN6-205ENST00000564846 FUNDC1Q8IVP5 155 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 ULK2Q8IYT8 1036 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 DEFB107AQ8IZN7 70 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 PPFIBP2Q8ND30 876 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 OR9I1Q8NGQ6 314 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 OR5K2Q8NHB8 316 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 OR4K3Q96R72 315 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 FARSBQ9NSD9 589 aaKnown RBP18.98■□□□□ 0.63
CLN6-205ENST00000564846 WNT16Q9UBV4 365 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 SUFUQ9UMX1 484 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 PSMD13Q9UNM6 376 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 KANSL1LA0AUZ9 987 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 SERTM1A2A2V5 107 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 POM121BA6NF01 834 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 C10orf142B7Z368 130 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 PRAMEF4O60810 478 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 HNF4AP41235 474 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 PNLIPRP1P54315 467 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 TBPL1P62380 186 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 MMEL1Q495T6 779 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 SGO1Q5FBB7 561 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 XKR6Q5GH73 641 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 PRAMEF9Q5VWM5 478 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 CAPRIN2Q6IMN6 1127 aaKnown RBP18.98■□□□□ 0.63
CLN6-205ENST00000564846 DSELQ8IZU8 1212 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 OR5AR1Q8NGP9 310 aa18.98■□□□□ 0.63
CLN6-205ENST00000564846 TSPEARQ8WU66 669 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms