RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 NOS2P35228 1153 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 SLC1A2P43004 574 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 YBEYP58557 167 aaPredicted RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 CD47Q08722 323 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 SPANXN2Q5MJ10 180 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ZBTB49Q6ZSB9 765 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 C12orf40Q86WS4 652 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 HORMAD2Q8N7B1 307 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 MDGA1Q8NFP4 955 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TLCD1Q96CP7 247 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 HOPXQ9BPY8 73 aaPredicted RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 SLC25A23Q9BV35 468 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 COG4Q9H9E3 785 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 KCNK13Q9HB14 408 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 MARCH5Q9NX47 278 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ACTR3BQ9P1U1 418 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 MOSPD1Q9UJG1 213 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 PTBP2Q9UKA9 531 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 PCDHA11Q9Y5I1 949 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 MAGEA13PA6NCF6 341 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 NEDD8-MDP1E9PL57 170 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 KPNA4O00629 521 aaPredicted RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 MAFKO60675 156 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 CBFA2T3O75081 653 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 DUSP11O75319 330 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 TNFRSF21O75509 655 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 PROCP04070 461 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 FGF1P05230 155 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 GABRR2P28476 465 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 DSG1Q02413 1049 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 SLC13A2Q13183 592 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 SLC9A4Q6AI14 798 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 PSRC1Q6PGN9 363 aaPredicted RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 TMEM207Q6UWW9 146 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ZHX1-C8orf76Q96EF9 292 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 NECTIN4Q96NY8 510 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 WRAP53Q9BUR4 548 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 C9orf16Q9BUW7 83 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 SCUBE2Q9NQ36 999 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 EXD2Q9NVH0 621 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 LRCH1Q9Y2L9 728 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ZBTB14O43829 449 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 NIPSNAP2O75323 286 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 STAU1O95793 577 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 TXNDC12O95881 172 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 HNRNPCP07910 306 aaKnown RBP eCLIP3.29□□□□□ -1.882e-6■□□□□ 8.2
CHD9-213ENST00000564845 CORO1AP31146 461 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 HNF4AP41235 474 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 SLC1A6P48664 564 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 DUSP3P51452 185 aaPredicted RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 UBE3AQ05086 875 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TDGQ13569 410 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 SMCO1Q147U7 214 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 MFSD13AQ14CX5 517 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ZRANB3Q5FWF4 1079 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 PAQR7Q86WK9 346 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TMEM17Q86X19 198 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 CARFQ8N187 725 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TMEM199Q8N511 208 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 CMASQ8NFW8 434 aaPredicted RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 HPS1Q92902 700 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 FERD3LQ96RJ6 166 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 C11orf84Q9BUA3 381 aaPredicted RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 ACE2Q9BYF1 805 aaPredicted RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 SEMA4CQ9C0C4 833 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 QRSL1Q9H0R6 528 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 ABCB8Q9NUT2 735 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 PAK1IP1Q9NWT1 392 aaPredicted RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 WARS2Q9UGM6 360 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 SLCO3A1Q9UIG8 710 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 DAPK2Q9UIK4 370 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 SLC9A8Q9Y2E8 581 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TRAF6Q9Y4K3 522 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 PCDHB9Q9Y5E1 797 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 PITPNM1O00562 1244 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 EPCAMP16422 314 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 COTL1Q14019 142 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 CTC1Q2NKJ3 1217 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ANKDD1AQ495B1 522 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 HSD17B12Q53GQ0 312 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TMEM132CQ8N3T6 1108 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ZCCHC9Q8N567 271 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 TTC29Q8NA56 475 aaPredicted RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 C3orf30Q96M34 536 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 CAMK1GQ96NX5 476 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 SEMA3CQ99985 751 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 IMPAD1Q9NX62 359 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 COPS7AQ9UBW8 275 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 CA5BQ9Y2D0 317 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TDRD15B5MCY1 1934 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 KPNA3O00505 521 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 ZNF30P17039 623 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 ATF4P18848 351 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 HLA-DPA1P20036 260 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 CPT2P23786 658 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 ARNTP27540 789 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 MAT2AP31153 395 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 RCVRNP35243 200 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 ALDH9A1P49189 494 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 DSTNP60981 165 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms