RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 MPP5Q8N3R9 675 aa17.83■□□□□ 0.44
CLN6-204ENST00000564752 ANP32BQ92688 251 aaKnown RBP17.83■□□□□ 0.44
CLN6-204ENST00000564752 N4BP2L2Q92802 583 aaPredicted RBP17.83■□□□□ 0.44
CLN6-204ENST00000564752 OSBPL9Q96SU4 736 aa17.83■□□□□ 0.44
CLN6-204ENST00000564752 NUDT9Q9BW91 350 aa17.83■□□□□ 0.44
CLN6-204ENST00000564752 TRMT1Q9NXH9 659 aaKnown RBP17.83■□□□□ 0.44
CLN6-204ENST00000564752 TDRKHQ9Y2W6 561 aaKnown RBP17.83■□□□□ 0.44
CLN6-204ENST00000564752 A0A0J9YY10 115 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 GOLGA6L10A0A0M3HER8 536 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 A6NL46 340 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 PRMT5O14744 637 aaPredicted RBP17.82■□□□□ 0.44
CLN6-204ENST00000564752 DPM1O60762 260 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 GNLYP22749 145 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 COILP38432 576 aaPredicted RBP17.82■□□□□ 0.44
CLN6-204ENST00000564752 MAGEA6P43360 314 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 ATP1A4Q13733 1029 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 SSPNQ14714 243 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 TMED2Q15363 201 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 CYP1B1Q16678 543 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 JMJD6Q6NYC1 403 aaPredicted RBP17.82■□□□□ 0.44
CLN6-204ENST00000564752 CCDC137Q6PK04 289 aaKnown RBP17.82■□□□□ 0.44
CLN6-204ENST00000564752 RAB43Q86YS6 212 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 HPS6Q86YV9 775 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 LKAAEAR1Q8TD35 194 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 COG1Q8WTW3 980 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 MFSD3Q96ES6 412 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 C17orf62Q9BQA9 187 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 KIFC1Q9BW19 673 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 SOX13Q9UN79 622 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 G3BP2Q9UN86 482 aaKnown RBP17.82■□□□□ 0.44
CLN6-204ENST00000564752 PADI2Q9Y2J8 665 aa17.82■□□□□ 0.44
CLN6-204ENST00000564752 SPTAN1Q13813 2472 aaKnown RBP17.81■□□□□ 0.44
CLN6-204ENST00000564752 TNRC6AQ8NDV7 1962 aaKnown RBP17.81■□□□□ 0.44
CLN6-204ENST00000564752 BLACEA4D250 179 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 IQCF5A8MTL0 148 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 KDM1AO60341 852 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 NDUFS3O75489 264 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 APOA4P06727 396 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 CTSBP07858 339 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 CCR7P32248 378 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 HSPA14Q0VDF9 509 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 INPP5JQ15735 1006 aaPredicted RBP17.81■□□□□ 0.44
CLN6-204ENST00000564752 SLC5A12Q1EHB4 618 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 DEFB110Q30KQ9 67 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 MLIPQ5VWP3 458 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 PTRHD1Q6GMV3 140 aaKnown RBP17.81■□□□□ 0.44
CLN6-204ENST00000564752 CASC4Q6P4E1 433 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 CES3Q6UWW8 571 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 SLC22A15Q8IZD6 547 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 DNAJC22Q8N4W6 341 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 PROKR1Q8TCW9 393 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 ACTRT1Q8TDG2 376 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 ASZ1Q8WWH4 475 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 IP6K3Q96PC2 410 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 GBP5Q96PP8 586 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 SMAD5Q99717 465 aaKnown RBP17.81■□□□□ 0.44
CLN6-204ENST00000564752 CARD6Q9BX69 1037 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 GPR83Q9NYM4 423 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 SAMD15Q9P1V8 674 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 GNPTGQ9UJJ9 305 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 PLAGL1Q9UM63 463 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 SNX12Q9UMY4 172 aa17.81■□□□□ 0.44
CLN6-204ENST00000564752 PHF2O75151 1096 aa17.8■□□□□ 0.44
CLN6-204ENST00000564752 VAPBO95292 243 aa17.8■□□□□ 0.44
CLN6-204ENST00000564752 CD63P08962 238 aa17.8■□□□□ 0.44
CLN6-204ENST00000564752 PEBP1P30086 187 aaKnown RBP17.8■□□□□ 0.44
CLN6-204ENST00000564752 OTX2P32243 289 aa17.8■□□□□ 0.44
CLN6-204ENST00000564752 DCDP81605 110 aaKnown RBP17.8■□□□□ 0.44
CLN6-204ENST00000564752 KIR2DS3Q14952 304 aa17.8■□□□□ 0.44
CLN6-204ENST00000564752 DNAJC21Q5F1R6 531 aaKnown RBP17.8■□□□□ 0.44
CLN6-204ENST00000564752 C1orf189Q5VU69 101 aa17.8■□□□□ 0.44
CLN6-204ENST00000564752 ANKRD22Q5VYY1 191 aa17.8■□□□□ 0.44
CLN6-204ENST00000564752 MRNIPQ6NTE8 343 aa17.8■□□□□ 0.44
CLN6-204ENST00000564752 LRRC6Q86X45 466 aa17.8■□□□□ 0.44
CLN6-204ENST00000564752 KRT222Q8N1A0 295 aa17.8■□□□□ 0.44
CLN6-204ENST00000564752 RBMXL3Q8N7X1 1067 aaKnown RBP17.8■□□□□ 0.44
CLN6-204ENST00000564752 Q8NA96 180 aa17.8■□□□□ 0.44
CLN6-204ENST00000564752 GRK7Q8WTQ7 553 aa17.8■□□□□ 0.44
CLN6-204ENST00000564752 PANX3Q96QZ0 392 aa17.8■□□□□ 0.44
CLN6-204ENST00000564752 MFRPQ9BY79 579 aa17.8■□□□□ 0.44
CLN6-204ENST00000564752 TEX15Q9BXT5 2789 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 ISM1B1AKI9 464 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 CES2O00748 559 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 PFDN6O15212 129 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 ZSCAN9O15535 394 aaPredicted RBP17.79■□□□□ 0.44
CLN6-204ENST00000564752 AVILO75366 819 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 PAMP19021 973 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 ARNTP27540 789 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 FNTAP49354 379 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 EIF3BP55884 814 aaKnown RBP17.79■□□□□ 0.44
CLN6-204ENST00000564752 KYNUQ16719 465 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 RNF187Q5TA31 235 aaPredicted RBP17.79■□□□□ 0.44
CLN6-204ENST00000564752 FHL5Q5TD97 284 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 ARMC3Q5W041 872 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 KIAA0930Q6ICG6 404 aaPredicted RBP17.79■□□□□ 0.44
CLN6-204ENST00000564752 TLDC1Q6P9B6 456 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 MRGPREQ86SM8 312 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 SDCCAG8Q86SQ7 713 aaPredicted RBP17.79■□□□□ 0.44
CLN6-204ENST00000564752 ZNF655Q8N720 491 aaPredicted RBP17.79■□□□□ 0.44
CLN6-204ENST00000564752 GSDMBQ8TAX9 411 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms