RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 PSMA3P25788 255 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 MSNP26038 577 aaKnown RBP13.54□□□□□ -0.24
CDR2-204ENST00000564542 TNFRSF8P28908 595 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 PKLRP30613 574 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 TSFMP43897 325 aaKnown RBP13.54□□□□□ -0.24
CDR2-204ENST00000564542 RAB28P51157 221 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 PER3P56645 1201 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 PARP6Q2NL67 630 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 AGAP7PQ5VUJ5 663 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 IRAK1BP1Q5VVH5 260 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 B3GNTL1Q67FW5 361 aaPredicted RBP13.54□□□□□ -0.24
CDR2-204ENST00000564542 TTLL10Q6ZVT0 673 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 OVCH1Q7RTY7 1134 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 KCNMB4Q86W47 210 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 AGAP4Q96P64 663 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 ALS2CR12Q96Q35 445 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 SPSB2Q99619 263 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 SLC26A1Q9H2B4 701 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 MRM3Q9HC36 420 aaKnown RBP13.54□□□□□ -0.24
CDR2-204ENST00000564542 LUC7LQ9NQ29 371 aaKnown RBP13.54□□□□□ -0.24
CDR2-204ENST00000564542 ALOX12BO75342 701 aa13.53□□□□□ -0.24
CDR2-204ENST00000564542 PIM1P11309 404 aaPredicted RBP13.53□□□□□ -0.24
CDR2-204ENST00000564542 EDN3P14138 238 aa13.53□□□□□ -0.24
CDR2-204ENST00000564542 FOXN2P32314 431 aa13.53□□□□□ -0.24
CDR2-204ENST00000564542 RWDD2BP57060 319 aa13.53□□□□□ -0.24
CDR2-204ENST00000564542 ZNF169Q14929 603 aaPredicted RBP13.53□□□□□ -0.24
CDR2-204ENST00000564542 SPA17Q15506 151 aa13.53□□□□□ -0.24
CDR2-204ENST00000564542 NKG7Q16617 165 aa13.53□□□□□ -0.24
CDR2-204ENST00000564542 P3H1Q32P28 736 aa13.53□□□□□ -0.24
CDR2-204ENST00000564542 DNAJC21Q5F1R6 531 aaKnown RBP13.53□□□□□ -0.24
CDR2-204ENST00000564542 YOD1Q5VVQ6 348 aaPredicted RBP13.53□□□□□ -0.24
CDR2-204ENST00000564542 NAPRTQ6XQN6 538 aa13.53□□□□□ -0.24
CDR2-204ENST00000564542 COX15Q7KZN9 410 aa13.53□□□□□ -0.24
CDR2-204ENST00000564542 MCATQ8IVS2 390 aaKnown RBP13.53□□□□□ -0.24
CDR2-204ENST00000564542 FAM20CQ8IXL6 584 aa13.53□□□□□ -0.24
CDR2-204ENST00000564542 SLC22A15Q8IZD6 547 aa13.53□□□□□ -0.24
CDR2-204ENST00000564542 LINC01555Q8NAE3 123 aa13.53□□□□□ -0.24
CDR2-204ENST00000564542 GRHL3Q8TE85 626 aa13.53□□□□□ -0.24
CDR2-204ENST00000564542 SLC22A18Q96BI1 424 aa13.53□□□□□ -0.24
CDR2-204ENST00000564542 CALR3Q96L12 384 aaKnown RBP13.53□□□□□ -0.24
CDR2-204ENST00000564542 MENTQ9BUN1 341 aa13.53□□□□□ -0.24
CDR2-204ENST00000564542 ENAMQ9NRM1 1142 aa13.53□□□□□ -0.24
CDR2-204ENST00000564542 NXT1Q9UKK6 140 aaKnown RBP13.53□□□□□ -0.24
CDR2-204ENST00000564542 HS3ST3B1Q9Y662 390 aa13.53□□□□□ -0.24
CDR2-204ENST00000564542 DOCK10Q96BY6 2186 aa13.52□□□□□ -0.24
CDR2-204ENST00000564542 OR51F1A6NGY5 319 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 F8W8V4 182 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 DSCR3O14972 297 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 LRRTM2O43300 516 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 METTL18O95568 372 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 RPN2P04844 631 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 CETN2P41208 172 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 CDC16Q13042 620 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 TUBB8Q3ZCM7 444 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 KIRREL2Q6UWL6 708 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 CCDC170Q8IYT3 715 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 TC2NQ8N9U0 490 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 FAM71DQ8N9W8 422 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 DNAJB14Q8TBM8 379 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 FAR1Q8WVX9 515 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 ALG3Q92685 438 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 VPS50Q96JG6 964 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 CNDP1Q96KN2 507 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 LHPPQ9H008 270 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 EPS8L2Q9H6S3 715 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 CUTCQ9NTM9 273 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 INTS7Q9NVH2 962 aaKnown RBP13.52□□□□□ -0.25
CDR2-204ENST00000564542 PIH1D1Q9NWS0 290 aaKnown RBP13.52□□□□□ -0.25
CDR2-204ENST00000564542 IMPACTQ9P2X3 320 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 OSGIN2Q9Y236 505 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 KLHL20Q9Y2M5 609 aa13.52□□□□□ -0.25
CDR2-204ENST00000564542 TEP1Q99973 2627 aaKnown RBP13.51□□□□□ -0.25
CDR2-204ENST00000564542 CCDC162PA2VCL2 907 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 OR1I1O60431 355 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 S1PR4O95977 384 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 CD9P21926 228 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 GRM7Q14831 915 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 TLR1Q15399 786 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 ZRSR2Q15696 482 aaKnown RBP13.51□□□□□ -0.25
CDR2-204ENST00000564542 ZC3H12BQ5HYM0 836 aaKnown RBP13.51□□□□□ -0.25
CDR2-204ENST00000564542 TCTE1Q5JU00 501 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 AADACL2Q6P093 401 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 AFTPHQ6ULP2 937 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 LINC00523Q86TU6 105 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 DCUN1D3Q8IWE4 304 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 OR13J1Q8NGT2 312 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 ZNF285Q96NJ3 590 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 SLX1AQ9BQ83 275 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 SOX17Q9H6I2 414 aaPredicted RBP13.51□□□□□ -0.25
CDR2-204ENST00000564542 SEMA3GQ9NS98 782 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.51□□□□□ -0.25
CDR2-204ENST00000564542 CTSFQ9UBX1 484 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 ENTPD4Q9Y227 616 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 OTOGQ6ZRI0 2925 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 APCP25054 2843 aa13.51□□□□□ -0.25
CDR2-204ENST00000564542 FITM1A5D6W6 292 aa13.5□□□□□ -0.25
CDR2-204ENST00000564542 GOLGA6L9A6NEM1 432 aa13.5□□□□□ -0.25
CDR2-204ENST00000564542 VSTM2BA6NLU5 285 aa13.5□□□□□ -0.25
CDR2-204ENST00000564542 PSMD3O43242 534 aa13.5□□□□□ -0.25
CDR2-204ENST00000564542 HNRNPRO43390 633 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms