RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 HOXC8P31273 242 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 CLCNKAP51800 687 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 PSMC6P62333 389 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 DRAP1Q14919 205 aaPredicted RBP4.77□□□□□ -1.65
LINC00254-201ENST00000563416 USP41Q3LFD5 358 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 ZNF718Q3SXZ3 478 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 CEP55Q53EZ4 464 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 PLEKHS1Q5SXH7 462 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 C9orf50Q5SZB4 431 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 RPUSD3Q6P087 351 aaKnown RBP4.77□□□□□ -1.65
LINC00254-201ENST00000563416 MOXD1Q6UVY6 613 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 SLC36A4Q6YBV0 504 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 TUBA1AQ71U36 451 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 BLIDQ8IZY5 108 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 SPATA6LQ8N4H0 392 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 JAKMIP2Q96AA8 810 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 PABPC5Q96DU9 382 aaKnown RBP4.77□□□□□ -1.65
LINC00254-201ENST00000563416 TMEM19Q96HH6 336 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 SLC41A2Q96JW4 573 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 MBOAT7Q96N66 472 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 TUBA1CQ9BQE3 449 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 ADPGKQ9BRR6 497 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 LLPHQ9BRT6 129 aaKnown RBP4.77□□□□□ -1.65
LINC00254-201ENST00000563416 C16orf70Q9BSU1 422 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 MAK16Q9BXY0 300 aaKnown RBP4.77□□□□□ -1.65
LINC00254-201ENST00000563416 EDEM3Q9BZQ6 932 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 EBF2Q9HAK2 575 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 PCDH9Q9HC56 1237 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 SLC6A13Q9NSD5 602 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 LIMA1Q9UHB6 759 aaKnown RBP4.77□□□□□ -1.65
LINC00254-201ENST00000563416 CITO14578 2027 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 IGKV6D-21A0A0A0MT36 114 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 GSTTP1A0A1W2PQM5 241 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 LIPT2A6NK58 231 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 EIF3CLB5ME19 914 aaKnown RBP4.76□□□□□ -1.65
LINC00254-201ENST00000563416 MID1O15344 667 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 JAK2O60674 1132 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 ERAL1O75616 437 aaKnown RBP4.76□□□□□ -1.65
LINC00254-201ENST00000563416 ZNF432O94892 652 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 CSPG5O95196 566 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 HSPA4LO95757 839 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 MMP1P03956 469 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 LGALS2P05162 132 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 CYC1P08574 325 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 F7P08709 466 aaPredicted RBP4.76□□□□□ -1.65
LINC00254-201ENST00000563416 ZNF286BP0CG31 522 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 NFKBIAP25963 317 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 CALRP27797 417 aaKnown RBP4.76□□□□□ -1.65
LINC00254-201ENST00000563416 ACSL1P33121 698 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 HADHAP40939 763 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 EIF2DP41214 584 aaKnown RBP4.76□□□□□ -1.65
LINC00254-201ENST00000563416 HMGN5P82970 282 aaKnown RBP4.76□□□□□ -1.65
LINC00254-201ENST00000563416 PLIN5Q00G26 463 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 LRMPQ12912 555 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 AIMP2Q13155 320 aaKnown RBP4.76□□□□□ -1.65
LINC00254-201ENST00000563416 ITGB3BPQ13352 177 aaPredicted RBP4.76□□□□□ -1.65
LINC00254-201ENST00000563416 NONOQ15233 471 aaKnown RBP eCLIP4.76□□□□□ -1.65
LINC00254-201ENST00000563416 ZRSR1Q15695 479 aaKnown RBP4.76□□□□□ -1.65
LINC00254-201ENST00000563416 C2orf68Q2NKX9 166 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 PAPPA-AS1Q5QFB9 102 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 CDC73Q6P1J9 531 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 TMEM154Q6P9G4 183 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 CUZD1Q86UP6 607 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 CCDC83Q8IWF9 413 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 POC1AQ8NBT0 407 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 TBCKQ8TEA7 893 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 FIG4Q92562 907 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 SMARCE1Q969G3 411 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 VMP1Q96GC9 406 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 SPATA33Q96N06 139 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 TKTL2Q9H0I9 626 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 PPP1R3EQ9H7J1 279 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 EVA1AQ9H8M9 152 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 UBTD1Q9HAC8 227 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 PLXNA4Q9HCM2 1894 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 C1RLQ9NZP8 487 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 TINAGQ9UJW2 476 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 KCNJ14Q9UNX9 436 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 EYSQ5T1H1 3165 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 COL4A6Q14031 1691 aa4.76□□□□□ -1.65
LINC00254-201ENST00000563416 COL6A3P12111 3177 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 ANK1P16157 1881 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 A0A0G2JPF8 293 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 HNRNPCL3B7ZW38 293 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 HNRNPCL1O60812 293 aaKnown RBP4.75□□□□□ -1.65
LINC00254-201ENST00000563416 TBCAO75347 108 aaKnown RBP4.75□□□□□ -1.65
LINC00254-201ENST00000563416 SEC31AO94979 1220 aaKnown RBP4.75□□□□□ -1.65
LINC00254-201ENST00000563416 CCNE2O96020 404 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 TIMP1P01033 207 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 SPARCP09486 303 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 SUPT20HL2P0C7V6 817 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 HNRNPCL4P0DMR1 293 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 AMD1P17707 334 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 DGKAP23743 735 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 MCM3P25205 808 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 MT3P25713 68 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 OAS2P29728 719 aaKnown RBP4.75□□□□□ -1.65
LINC00254-201ENST00000563416 KRT2P35908 639 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 TCF7P36402 384 aaPredicted RBP4.75□□□□□ -1.65
LINC00254-201ENST00000563416 PPARGP37231 505 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms