RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 WDPCPO95876 746 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 MYL1P05976 194 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 TPOP07202 933 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 GPR89BP0CG08 455 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 VCLP18206 1134 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 POLR2CP19387 275 aaPredicted RBP5.09□□□□□ -1.59
HERC1-213ENST00000561359 IL4RP24394 825 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 SDC4P31431 198 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 GDNFP39905 211 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 STC1P52823 247 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 EPHB1P54762 984 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 TRAF2Q12933 501 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 PRKAA1Q13131 559 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 OLIG2Q13516 323 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 GALNT3Q14435 633 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 RFTN1Q14699 578 aaPredicted RBP5.09□□□□□ -1.59
HERC1-213ENST00000561359 PCBP2Q15366 365 aaKnown RBP eCLIP5.09□□□□□ -1.59
HERC1-213ENST00000561359 MLANAQ16655 118 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 CCDC40Q4G0X9 1142 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 C2CD6Q53TS8 623 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 TMEM201Q5SNT2 666 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 RESP18Q5W5W9 173 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 FBXW10Q5XX13 1052 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 RHBDD2Q6NTF9 364 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 ENOSF1Q7L5Y1 443 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 REC114Q7Z4M0 266 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 LRRTM4Q86VH4 590 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 CCDC71Q8IV32 467 aaPredicted RBP5.09□□□□□ -1.59
HERC1-213ENST00000561359 KBTBD2Q8IY47 623 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 CPSF7Q8N684 471 aaKnown RBP5.09□□□□□ -1.59
HERC1-213ENST00000561359 SIRT6Q8N6T7 355 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 TMEM35BQ8NCS4 154 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 MYRIPQ8NFW9 859 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 OR11G2Q8NGC1 345 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 BRIX1Q8TDN6 353 aaKnown RBP5.09□□□□□ -1.59
HERC1-213ENST00000561359 ZFPM2Q8WW38 1151 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 RND1Q92730 232 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 Q96M66 194 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 ZNF396Q96N95 335 aaPredicted RBP5.09□□□□□ -1.59
HERC1-213ENST00000561359 SMIM14Q96QK8 99 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 PSKH2Q96QS6 385 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 SECISBP2Q96T21 854 aaKnown RBP5.09□□□□□ -1.59
HERC1-213ENST00000561359 TIMM29Q9BSF4 260 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 KLHL25Q9H0H3 589 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 FAM83DQ9H4H8 585 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 LRRC19Q9H756 370 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 NOD2Q9HC29 1040 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 MRM3Q9HC36 420 aaKnown RBP5.09□□□□□ -1.59
HERC1-213ENST00000561359 ZNF160Q9HCG1 818 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 IRAK4Q9NWZ3 460 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 DUSP13Q9UII6 198 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 TMEM59LQ9UK28 342 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 NOCTQ9UK39 431 aaKnown RBP5.09□□□□□ -1.59
HERC1-213ENST00000561359 CFAP20Q9Y6A4 193 aaKnown RBP5.09□□□□□ -1.59
HERC1-213ENST00000561359 AP1M2Q9Y6Q5 423 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 ARID1AO14497 2285 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 CCDC88CQ9P219 2028 aa5.09□□□□□ -1.6
HERC1-213ENST00000561359 MEGF8Q7Z7M0 2845 aa5.09□□□□□ -1.6
HERC1-213ENST00000561359 ANKRD12Q6UB98 2062 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 BECN2A8MW95 431 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 CHUKO15111 745 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 FGF10O15520 208 aaPredicted RBP5.08□□□□□ -1.6
HERC1-213ENST00000561359 TTI1O43156 1089 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 ASNA1O43681 348 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 RRP9O43818 475 aaKnown RBP5.08□□□□□ -1.6
HERC1-213ENST00000561359 KLK8O60259 260 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 ZRANB2O95218 330 aaKnown RBP eCLIP5.08□□□□□ -1.6
HERC1-213ENST00000561359 SIX3O95343 332 aaPredicted RBP5.08□□□□□ -1.6
HERC1-213ENST00000561359 CLDN7O95471 211 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 HPP00738 406 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 MSL3P1P0C860 447 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 PRR35P0CG20 571 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 ST6GAL1P15907 406 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 SYT1P21579 422 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 KIR2DL3P43628 341 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 GABRB2P47870 512 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 HK2P52789 917 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 CTSCP53634 463 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 TPI1P60174 286 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 HSF1Q00613 529 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 SNTB1Q13884 538 aaKnown RBP5.08□□□□□ -1.6
HERC1-213ENST00000561359 RABEP1Q15276 862 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 RPE65Q16518 533 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 CCDC14Q49A88 953 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 ZNF766Q5HY98 468 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 ZNF569Q5MCW4 686 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 Q5PR19 223 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 HENMT1Q5T8I9 393 aaKnown RBP5.08□□□□□ -1.6
HERC1-213ENST00000561359 TMEM211Q6ICI0 200 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 SCYL2Q6P3W7 929 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 GJB7Q6PEY0 223 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 ARHGAP36Q6ZRI8 547 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 SHISA6Q6ZSJ9 500 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 SLFN11Q7Z7L1 901 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 C11orf96Q7Z7L8 435 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 ADGRG6Q86SQ4 1221 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 TRAPPC5Q8IUR0 188 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 P3H2Q8IVL5 708 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 GHDCQ8N2G8 530 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 ZNF655Q8N720 491 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms