RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ADAMTS17Q8TE56 1095 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 SLCO2A1Q92959 643 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 IL17FQ96PD4 163 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 GPR87Q9BY21 358 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 OR6C2Q9NZP2 312 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 NBASA2RRP1 2371 aa15.4■□□□□ 0.06
LMX1B-204ENST00000561065 NUP210LQ5VU65 1888 aa15.4■□□□□ 0.06
LMX1B-204ENST00000561065 A0A0J9YY10 115 aa15.4■□□□□ 0.06
LMX1B-204ENST00000561065 GOLGA8KD6RF30 607 aa15.4■□□□□ 0.06
LMX1B-204ENST00000561065 GOLGA8TH3BQL2 631 aa15.4■□□□□ 0.06
LMX1B-204ENST00000561065 ZNF185O15231 689 aa15.4■□□□□ 0.06
LMX1B-204ENST00000561065 ZNF749O43361 778 aa15.4■□□□□ 0.06
LMX1B-204ENST00000561065 RFPL1O75677 317 aa15.4■□□□□ 0.06
LMX1B-204ENST00000561065 ITGA1P56199 1179 aa15.4■□□□□ 0.06
LMX1B-204ENST00000561065 DNAJC21Q5F1R6 531 aaKnown RBP15.4■□□□□ 0.06
LMX1B-204ENST00000561065 KIAA0930Q6ICG6 404 aaPredicted RBP15.4■□□□□ 0.06
LMX1B-204ENST00000561065 CLIP3Q96DZ5 547 aa15.4■□□□□ 0.06
LMX1B-204ENST00000561065 CAPZA3Q96KX2 299 aa15.4■□□□□ 0.06
LMX1B-204ENST00000561065 FOPNLQ96NB1 174 aa15.4■□□□□ 0.06
LMX1B-204ENST00000561065 CCDC68Q9H2F9 335 aa15.4■□□□□ 0.06
LMX1B-204ENST00000561065 CLMPQ9H6B4 373 aa15.4■□□□□ 0.06
LMX1B-204ENST00000561065 SYTL2Q9HCH5 934 aa15.4■□□□□ 0.06
LMX1B-204ENST00000561065 TLK1Q9UKI8 766 aa15.4■□□□□ 0.06
LMX1B-204ENST00000561065 RUVBL2Q9Y230 463 aaKnown RBP15.4■□□□□ 0.06
LMX1B-204ENST00000561065 FARSAQ9Y285 508 aaKnown RBP15.4■□□□□ 0.06
LMX1B-204ENST00000561065 MAD1L1Q9Y6D9 718 aa15.4■□□□□ 0.06
LMX1B-204ENST00000561065 COL12A1Q99715 3063 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 E7EQ34 232 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 AVILO75366 819 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 SLCO2B1O94956 709 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 TTC4O95801 387 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 ESR1P03372 595 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 F7P08709 466 aaPredicted RBP15.39■□□□□ 0.05
LMX1B-204ENST00000561065 RPS3P23396 243 aaKnown RBP eCLIP15.39■□□□□ 0.05
LMX1B-204ENST00000561065 CASQ1P31415 396 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 PTGIRP43119 386 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 CSRP3P50461 194 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 RAB28P51157 221 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 RPS15P62841 145 aaKnown RBP15.39■□□□□ 0.05
LMX1B-204ENST00000561065 DHX34Q14147 1143 aaKnown RBP15.39■□□□□ 0.05
LMX1B-204ENST00000561065 KYNUQ16719 465 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 SLC5A12Q1EHB4 618 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 TYSND1Q2T9J0 566 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 NEPROQ6NW34 567 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 OTOAQ7RTW8 1153 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 TAX1BP1Q86VP1 789 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 SPNS2Q8IVW8 549 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 APLFQ8IW19 511 aaPredicted RBP15.39■□□□□ 0.05
LMX1B-204ENST00000561065 TMEM151BQ8IW70 566 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 DCUN1D3Q8IWE4 304 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 RAB42Q8N4Z0 105 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 CFAP61Q8NHU2 1237 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 MAGEC3Q8TD91 643 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 SERPINB12Q96P63 405 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 DDX47Q9H0S4 455 aaKnown RBP15.39■□□□□ 0.05
LMX1B-204ENST00000561065 IL1RAPL1Q9NZN1 696 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 KLHL20Q9Y2M5 609 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 NEU2Q9Y3R4 380 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 NFS1Q9Y697 457 aa15.39■□□□□ 0.05
LMX1B-204ENST00000561065 FLNCQ14315 2725 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 PCM1Q15154 2024 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 USP27XA6NNY8 438 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 USP1O94782 785 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 KLK3P07288 261 aaPredicted RBP15.38■□□□□ 0.05
LMX1B-204ENST00000561065 RAB40ALP0C0E4 278 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 OGNP20774 298 aaKnown RBP15.38■□□□□ 0.05
LMX1B-204ENST00000561065 MAGP20916 626 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 CASRP41180 1078 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 BDKRB1P46663 353 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 ADARP55265 1226 aaKnown RBP15.38■□□□□ 0.05
LMX1B-204ENST00000561065 EIF3BP55884 814 aaKnown RBP15.38■□□□□ 0.05
LMX1B-204ENST00000561065 DR1Q01658 176 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 PTK6Q13882 451 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 KIR2DS3Q14952 304 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 NCF4Q15080 339 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 CCSMST1Q4G0I0 132 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 UNC5DQ6UXZ4 953 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 MAATS1Q7Z4T9 603 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 CAND1Q86VP6 1230 aaKnown RBP15.38■□□□□ 0.05
LMX1B-204ENST00000561065 CREG2Q8IUH2 290 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 PDIK1LQ8N165 341 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 C2orf73Q8N5S3 287 aaPredicted RBP15.38■□□□□ 0.05
LMX1B-204ENST00000561065 BBOF1Q8ND07 529 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 LPGAT1Q92604 370 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 TCTN2Q96GX1 697 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 BIRC8Q96P09 236 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 NLNQ9BYT8 704 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 CHRNA10Q9GZZ6 450 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 SPRTNQ9H040 489 aaPredicted RBP15.38■□□□□ 0.05
LMX1B-204ENST00000561065 INTS10Q9NVR2 710 aaKnown RBP15.38■□□□□ 0.05
LMX1B-204ENST00000561065 TCFL5Q9UL49 500 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 PYCARDQ9ULZ3 195 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 SNX7Q9UNH6 387 aa15.38■□□□□ 0.05
LMX1B-204ENST00000561065 ARGFXA6NJG6 315 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 ISM1B1AKI9 464 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 E5RI56 91 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 MKRN2OSH3BPM6 223 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 GOLGA8MH3BSY2 632 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 DNALI1O14645 258 aaPredicted RBP15.37■□□□□ 0.05
LMX1B-204ENST00000561065 NIPSNAP2O75323 286 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms